Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MIR4506-201ENST00000584693 77 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC091903.1-201ENST00000624322 454 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC244205.2-202ENST00000635781 342 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 SNORD74.4-201ENST00000364129 80 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 Z99127.3-201ENST00000448158 395 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC018555.1-201ENST00000567548 1980 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 MIR216A-201ENST00000385063 110 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 Z99497.1-201ENST00000421282 135 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 RNU7-95P-201ENST00000459222 64 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 RNA5SP103-201ENST00000459503 118 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC025260.1-201ENST00000548858 430 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 uc_338.12-201ENST00000616344 181 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC009812.4-201ENST00000569134 1805 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC007256.1-201ENST00000392253 2765 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 HMGB1P5-201ENST00000255320 642 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 RNA5SP266-201ENST00000410273 108 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 MIR1468-201ENST00000410600 86 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 MTND2P25-201ENST00000449028 610 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC002553.2-201ENST00000453217 340 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 SRIP1-201ENST00000489235 288 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC090543.1-201ENST00000492168 485 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC010735.1-201ENST00000567305 1026 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AL451074.6-201ENST00000608512 729 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AL669942.2-201ENST00000620352 697 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC091895.1-201ENST00000624494 256 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 KPNA2P1-201ENST00000458289 1591 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 OR4G11P-202ENST00000642116 1414 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC104297.1-201ENST00000393779 870 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC234781.2-201ENST00000426370 994 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC117532.1-201ENST00000514638 323 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC087441.2-201ENST00000529141 262 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC010329.2-201ENST00000595195 2737 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 RANP4-201ENST00000413361 655 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AL445646.1-201ENST00000431784 216 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 MIR4738-201ENST00000579134 87 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 FAM35CP-201ENST00000554755 2470 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 ZNF271P-202ENST00000465539 1970 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 RN7SL93P-201ENST00000463035 293 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC017071.1-201ENST00000564407 2204 ntBASIC1.37□□□□□ -2.19
UBR4Q5T4S7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.37□□□□□ -2.19
UBR4Q5T4S7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 USP9YP2-201ENST00000504503 1000 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 USP9YP1-201ENST00000513521 1002 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 Y_RNA.644-201ENST00000459006 113 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 OR5AP1P-201ENST00000529730 940 ntBASIC1.36□□□□□ -2.19
UBR4Q5T4S7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.36□□□□□ -2.19
UBR4Q5T4S7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms