Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 AC055872.1-201ENST00000570978 278 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 AC008507.3-201ENST00000585753 472 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 AC097467.4-201ENST00000605504 141 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 AC015726.2-201ENST00000620112 122 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 AC099506.2-201ENST00000623074 221 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 PABPC1P8-201ENST00000452851 2086 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VARS2Q5ST30 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
VARS2Q5ST30 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 RNY4P30-201ENST00000410216 95 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC063976.4-201ENST00000421971 163 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC234775.1-201ENST00000454247 670 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 RN7SKP210-201ENST00000459176 261 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC135721.1-201ENST00000497954 479 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 LSM3P4-201ENST00000502948 309 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC010343.2-201ENST00000510162 224 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 Y_RNA.689-201ENST00000516589 107 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 SUMO2P18-201ENST00000518873 252 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VARS2Q5ST30 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 PRPF19P1-201ENST00000584766 898 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC006329.2-201ENST00000611491 394 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
VARS2Q5ST30 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VARS2Q5ST30 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VARS2Q5ST30 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
VARS2Q5ST30 AC116667.1-201ENST00000604855 2072 ntBASIC6.69□□□□□ -1.34
VARS2Q5ST30 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC010168.2-201ENST00000562691 5428 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC130650.2-201ENST00000618736 2403 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VARS2Q5ST30 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VARS2Q5ST30 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 Y_RNA.121-201ENST00000363309 113 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 MIR130B-202ENST00000385018 82 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 SNORA12.2-201ENST00000391040 156 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 RNU2-2P-201ENST00000410396 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC116036.1-201ENST00000412199 367 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 BX323845.3-201ENST00000428215 527 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC023141.3-201ENST00000436698 278 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC023818.1-201ENST00000498379 384 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC093767.1-201ENST00000504523 156 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC005868.1-201ENST00000536421 331 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 RNU2-4P-201ENST00000606190 192 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC005828.6-201ENST00000606610 232 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.15-201ENST00000611544 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.16-201ENST00000613119 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.12-201ENST00000613778 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.9-201ENST00000615427 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.11-201ENST00000616345 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.2-201ENST00000616535 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.3-201ENST00000617785 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.19-201ENST00000618602 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 RNU2-1-201ENST00000618664 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.6-201ENST00000619225 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.5-201ENST00000619465 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 U2.10-201ENST00000620268 191 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 AC007998.5-201ENST00000622938 237 ntBASIC6.68□□□□□ -1.34
VARS2Q5ST30 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms