Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AL451050.1-201ENST00000450126 415 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 USP9YP12-201ENST00000450481 570 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AL590365.1-201ENST00000450788 243 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AL162388.1-201ENST00000450912 352 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 RPS27AP17-201ENST00000463344 455 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 RPS26P28-201ENST00000470806 348 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 OR5H5P-201ENST00000503164 928 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC008958.1-201ENST00000511047 682 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 RNU6-718P-201ENST00000516166 105 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 OR5M7P-201ENST00000526140 972 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC069240.1-201ENST00000548774 375 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 TVP23BP1-201ENST00000557500 617 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC009063.1-201ENST00000563342 702 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC015912.2-201ENST00000571053 181 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 MIR4458-201ENST00000578872 75 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 MIR4286-201ENST00000580651 93 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 MIR548S-201ENST00000581352 82 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AL139286.1-201ENST00000604465 483 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AP003117.2-201ENST00000606010 545 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC091965.4-201ENST00000607691 587 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 MIR6867-201ENST00000610636 67 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 MAPK10-304ENST00000641341 3984 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 DCAF13P1-201ENST00000495256 1330 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RNU6-694P-201ENST00000364071 147 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RNU6-853P-201ENST00000364306 107 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RHOT1P2-201ENST00000366423 333 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RNU6-1042P-201ENST00000384204 107 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RNU6-878P-201ENST00000384578 110 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 SNORA40.3-201ENST00000390964 122 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 MTND4LP20-201ENST00000402379 270 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AL356095.1-201ENST00000417217 199 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC091862.1-201ENST00000438016 1100 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RPL23AP52-201ENST00000439311 478 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 MRPL48P1-201ENST00000445390 636 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 VN1R34P-201ENST00000447387 883 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RPL35P6-201ENST00000490024 372 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AP001025.2-201ENST00000490908 477 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC146944.2-203ENST00000502493 354 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC109464.2-201ENST00000510242 943 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC139495.1-202ENST00000513164 354 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC093853.1-201ENST00000515689 483 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RNU1-45P-201ENST00000517191 141 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 EEF1B2P4-201ENST00000551398 348 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RPS3AP4-201ENST00000555161 764 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC092325.1-201ENST00000566449 554 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 RN7SL600P-201ENST00000581811 299 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC005771.1-201ENST00000585581 349 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC025946.2-201ENST00000603398 234 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC079587.1-201ENST00000603846 277 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 LARP7P1-201ENST00000605576 316 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 MIR4496-201ENST00000635896 61 ntBASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms