Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNORA31.6-201ENST00000516241 130 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AC024940.3-201ENST00000538551 316 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AC091516.1-201ENST00000549191 703 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 MIR5096-201ENST00000583713 70 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 HMGN2P28-201ENST00000606102 262 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AL031666.3-201ENST00000609320 1006 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AC025574.2-201ENST00000615621 514 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 U6.101-201ENST00000637707 76 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.34□□□□□ -1.56
RSPO4Q2I0M5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RSPO4Q2I0M5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
RSPO4Q2I0M5 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.34□□□□□ -1.56
RSPO4Q2I0M5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RSPO4Q2I0M5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL138820.1-201ENST00000617901 5305 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL391987.6-201ENST00000305671 199 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 Y_RNA.237-201ENST00000364439 102 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 RNY3P13-201ENST00000365542 102 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 RNU6-128P-201ENST00000383976 107 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 Y_RNA.526-201ENST00000384572 110 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC097374.1-203ENST00000400783 485 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL583834.1-201ENST00000406943 343 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 Y_RNA.629-201ENST00000411368 105 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 COX6CP10-201ENST00000416832 224 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC233981.1-201ENST00000423224 461 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 TIMM9P1-201ENST00000436122 256 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL031659.1-201ENST00000447075 539 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 RPL7AP28-201ENST00000464513 571 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC104472.2-201ENST00000469035 601 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 RPS4XP20-201ENST00000505751 772 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 SNORA70.11-201ENST00000515987 138 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 SNORA70.13-201ENST00000516116 138 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 IGKV2-38-201ENST00000517443 247 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 CYCSP28-201ENST00000534284 321 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 SULT1C2P1-202ENST00000562418 459 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC025857.2-201ENST00000602711 238 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC068790.3-201ENST00000602988 553 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL512782.1-201ENST00000603093 364 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL590392.1-201ENST00000604960 446 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 MIR92B-201ENST00000607575 96 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 MIR6780A-201ENST00000615089 68 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AP001486.3-201ENST00000615334 372 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL357559.1-201ENST00000622228 274 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AL359955.1-201ENST00000455242 3275 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC092692.1-201ENST00000623625 2595 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC002525.1-201ENST00000624392 1622 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AC020656.2-201ENST00000613291 5309 ntBASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO4Q2I0M5 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 THAP12P4-201ENST00000528321 2266 ntBASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO4Q2I0M5 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms