Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 SNORD27.1-201ENST00000516319 72 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 RN7SKP116-201ENST00000516902 319 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 AC022832.1-201ENST00000530718 645 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.71□□□□□ -1.66
IRF9Q00978 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.71□□□□□ -1.66
IRF9Q00978 OR4K8P-201ENST00000578842 1048 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.71□□□□□ -1.66
IRF9Q00978 AC020910.3-201ENST00000603701 874 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 AC112230.1-201ENST00000604342 547 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 AL353621.2-201ENST00000605340 133 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 AL008729.2-201ENST00000606393 473 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 AL158211.4-201ENST00000606988 584 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 AC007497.1-201ENST00000610421 561 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.71□□□□□ -1.66
IRF9Q00978 ASNSP1-201ENST00000518311 1939 ntBASIC4.71□□□□□ -1.66
IRF9Q00978 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.71□□□□□ -1.66
IRF9Q00978 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
IRF9Q00978 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
IRF9Q00978 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
IRF9Q00978 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
IRF9Q00978 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
IRF9Q00978 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
IRF9Q00978 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
IRF9Q00978 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
IRF9Q00978 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
IRF9Q00978 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.7□□□□□ -1.66
IRF9Q00978 HSPE1P11-201ENST00000339579 310 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 Y_RNA.22-201ENST00000362492 102 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 RN7SKP95-201ENST00000362860 303 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 MIR558-201ENST00000384920 94 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
IRF9Q00978 RNU1-82P-201ENST00000390851 165 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 RSU1P3-201ENST00000412878 835 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 OR1AA1P-201ENST00000419597 916 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 OR2AM1P-201ENST00000422137 422 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AL391219.1-201ENST00000422570 483 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 RPS27AP12-201ENST00000429552 465 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 ATP5JP1-201ENST00000431631 322 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.7□□□□□ -1.66
IRF9Q00978 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 AC093019.1-201ENST00000443135 252 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 AC078785.3-201ENST00000476607 425 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 RN7SL727P-201ENST00000482164 296 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC068305.1-201ENST00000497406 726 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 GAPDHP56-201ENST00000506031 988 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 TMEM248P1-201ENST00000510579 951 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC010486.1-201ENST00000511793 424 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC114797.1-201ENST00000514003 728 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.7□□□□□ -1.66
IRF9Q00978 SNORD60.2-201ENST00000516883 86 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 RN7SKP147-201ENST00000517154 244 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.7□□□□□ -1.66
IRF9Q00978 OR5BN1P-201ENST00000532955 829 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 OR8L1P-201ENST00000534005 955 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
IRF9Q00978 AC123904.3-201ENST00000547218 814 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC068446.3-201ENST00000555285 382 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC068831.4-201ENST00000556118 109 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 MIR5699-201ENST00000578903 90 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC209154.1-201ENST00000582156 337 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AC018638.8-201ENST00000588755 281 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AP001429.1-201ENST00000602568 530 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AP003117.2-201ENST00000606010 545 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 SNORD91B-202ENST00000608459 222 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AL161637.1-201ENST00000622380 412 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 AL359697.1-201ENST00000624879 587 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
IRF9Q00978 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
IRF9Q00978 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
IRF9Q00978 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
IRF9Q00978 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.7□□□□□ -1.66
IRF9Q00978 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
IRF9Q00978 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
IRF9Q00978 AC092326.2-201ENST00000624772 1561 ntBASIC4.7□□□□□ -1.66
IRF9Q00978 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.69□□□□□ -1.66
IRF9Q00978 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 AC093535.2-201ENST00000624769 2326 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.69□□□□□ -1.66
IRF9Q00978 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 RNU6-511P-201ENST00000363496 107 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 Y_RNA.255-201ENST00000364581 97 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 Y_RNA.813-201ENST00000364639 102 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms