Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CL1P78423 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CL1P78423 TPMTP1-201ENST00000592307 737 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.35□□□□□ -1.87
CX3CL1P78423 IPO5P1-202ENST00000600039 287 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC006254.3-201ENST00000603353 884 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC011451.2-201ENST00000604303 598 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 AC239868.4-201ENST00000608318 671 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC025594.3-201ENST00000613068 790 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC114781.5-201ENST00000615297 108 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 C2orf27A-204ENST00000623058 969 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC025048.6-202ENST00000627667 438 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CX3CL1P78423 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CX3CL1P78423 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 AC004925.1-201ENST00000624256 2706 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 AC008725.1-201ENST00000605123 2263 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CX3CL1P78423 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CX3CL1P78423 RNU5E-5P-201ENST00000365379 116 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 RNA5SP167-201ENST00000365461 116 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 RNU6-1074P-201ENST00000383995 104 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 RNU6-533P-201ENST00000384144 107 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 SNORD3H-201ENST00000384486 214 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 RPL23AP26-201ENST00000412728 464 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AMD1P2-201ENST00000412936 992 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AL807761.1-201ENST00000417622 171 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.34□□□□□ -1.87
CX3CL1P78423 RPL23AP46-201ENST00000438548 490 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AL360221.1-201ENST00000445989 335 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AP000936.2-201ENST00000447151 681 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 RPS17P13-201ENST00000448974 407 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 RPS24P6-201ENST00000452670 400 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.34□□□□□ -1.87
CX3CL1P78423 AP1S2P1-201ENST00000457344 379 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 AC006517.1-201ENST00000480485 328 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AC041039.1-201ENST00000485656 536 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AC096751.1-202ENST00000502691 1067 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.34□□□□□ -1.87
CX3CL1P78423 AC005921.1-201ENST00000510589 286 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.34□□□□□ -1.87
CX3CL1P78423 AP002748.2-201ENST00000528671 348 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.34□□□□□ -1.87
CX3CL1P78423 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.34□□□□□ -1.87
CX3CL1P78423 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.34□□□□□ -1.87
CX3CL1P78423 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.34□□□□□ -1.87
CX3CL1P78423 AL161729.3-201ENST00000603533 673 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 MIR6748-201ENST00000610433 71 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 TUG1_1.1-201ENST00000610654 145 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 MIR7702-201ENST00000621931 59 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 AC079597.1-201ENST00000624306 508 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 MIR3653-201ENST00000625572 110 ntBASIC3.34□□□□□ -1.87
CX3CL1P78423 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CL1P78423 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.34□□□□□ -1.87
CX3CL1P78423 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.34□□□□□ -1.88
CX3CL1P78423 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CX3CL1P78423 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CX3CL1P78423 MTND5P33-201ENST00000571250 1450 ntBASIC3.34□□□□□ -1.88
CX3CL1P78423 AP001350.1-201ENST00000601906 1524 ntBASIC3.34□□□□□ -1.88
CX3CL1P78423 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CX3CL1P78423 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.34□□□□□ -1.88
CX3CL1P78423 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
CX3CL1P78423 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CL1P78423 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CL1P78423 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CX3CL1P78423 Y_RNA.51-201ENST00000362725 102 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 RNY4P24-201ENST00000362735 96 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 RNY3P10-201ENST00000384764 102 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 MIR607-201ENST00000385241 96 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 RN7SKP182-201ENST00000410772 298 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 FAR2P2-201ENST00000413041 594 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 RPS7P13-201ENST00000413955 498 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 SSXP9-201ENST00000417503 292 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 OR1AA1P-201ENST00000419597 916 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 BEND7P1-201ENST00000422058 457 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AF228730.2-201ENST00000438784 848 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms