Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 BX295541.1-201ENST00000417774 250 ntBASIC4.03□□□□□ -1.76
RAE1P78406 PIGFP2-201ENST00000421400 651 ntBASIC4.03□□□□□ -1.76
RAE1P78406 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 RPS12P5-201ENST00000423449 371 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AC005517.2-201ENST00000424673 553 ntBASIC4.03□□□□□ -1.76
RAE1P78406 USP9YP18-201ENST00000425912 695 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AL732292.1-201ENST00000426692 226 ntBASIC4.03□□□□□ -1.76
RAE1P78406 ISCA1P6-201ENST00000427740 390 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 RPS29P17-201ENST00000430795 166 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 AL358934.1-201ENST00000432346 324 ntBASIC4.03□□□□□ -1.76
RAE1P78406 ELOCP18-201ENST00000434209 337 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 AC112653.1-201ENST00000443851 386 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 snoU109.4-201ENST00000458953 143 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.03□□□□□ -1.76
RAE1P78406 AC007686.1-201ENST00000488511 463 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 RNU6-314P-201ENST00000516574 104 ntBASIC4.03□□□□□ -1.76
RAE1P78406 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.03□□□□□ -1.76
RAE1P78406 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 HMGB3P26-201ENST00000560051 582 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AL356432.3-201ENST00000568952 465 ntBASIC4.03□□□□□ -1.76
RAE1P78406 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.03□□□□□ -1.76
RAE1P78406 AC234771.5-201ENST00000600161 514 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AL451044.1-201ENST00000604867 238 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AC121334.2-201ENST00000605387 271 ntBASIC4.03□□□□□ -1.76
RAE1P78406 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 AL158209.2-201ENST00000619266 216 ntBASIC4.03□□□□□ -1.76
RAE1P78406 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 AL732618.1-201ENST00000623251 301 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AC040168.1-201ENST00000623594 991 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AC008785.1-201ENST00000624475 456 ntBASIC4.03□□□□□ -1.76
RAE1P78406 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAE1P78406 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RAE1P78406 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAE1P78406 Z73965.1-201ENST00000623412 2297 ntBASIC4.03□□□□□ -1.76
RAE1P78406 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RAE1P78406 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAE1P78406 AC139713.2-214ENST00000642059 1811 ntBASIC4.02□□□□□ -1.77
RAE1P78406 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RAE1P78406 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 ELF2P3-201ENST00000445099 1506 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RNA5SP388-201ENST00000362584 119 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.02□□□□□ -1.77
RAE1P78406 Y_RNA.248-201ENST00000364501 109 ntBASIC4.02□□□□□ -1.77
RAE1P78406 SNORA37-201ENST00000384504 129 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RNU6-821P-201ENST00000390995 107 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RPL23AP32-201ENST00000395315 459 ntBASIC4.02□□□□□ -1.77
RAE1P78406 MTND1P23-201ENST00000416931 372 ntBASIC4.02□□□□□ -1.77
RAE1P78406 MTND3P17-201ENST00000416968 344 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.02□□□□□ -1.77
RAE1P78406 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 RPL23AP89-201ENST00000439324 255 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.02□□□□□ -1.77
RAE1P78406 AL590399.6-201ENST00000446396 307 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC073587.1-201ENST00000447093 876 ntBASIC4.02□□□□□ -1.77
RAE1P78406 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.02□□□□□ -1.77
RAE1P78406 MTCO3P20-201ENST00000454926 688 ntBASIC4.02□□□□□ -1.77
RAE1P78406 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 RPL23AP24-201ENST00000458203 385 ntBASIC4.02□□□□□ -1.77
RAE1P78406 SNORD121B-201ENST00000458838 81 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RN7SL585P-201ENST00000470538 280 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC114967.1-201ENST00000504890 259 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC025554.1-201ENST00000505641 188 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.02□□□□□ -1.77
RAE1P78406 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.02□□□□□ -1.77
RAE1P78406 PARP4P3-201ENST00000510265 317 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RNA5SP49-201ENST00000516450 115 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RNA5SP519-201ENST00000516480 119 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RNA5SP360-201ENST00000516555 118 ntBASIC4.02□□□□□ -1.77
RAE1P78406 RN7SKP116-201ENST00000516902 319 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.02□□□□□ -1.77
RAE1P78406 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.02□□□□□ -1.77
RAE1P78406 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.02□□□□□ -1.77
RAE1P78406 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.02□□□□□ -1.77
RAE1P78406 SETP7-201ENST00000552169 453 ntBASIC4.02□□□□□ -1.77
RAE1P78406 MIR4458-201ENST00000578872 75 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.02□□□□□ -1.77
RAE1P78406 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.02□□□□□ -1.77
RAE1P78406 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms