Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RPS15AP28-201ENST00000435088 386 ntBASIC2.06□□□□□ -2.08
LSM3P62310 AL135938.1-201ENST00000443141 297 ntBASIC2.06□□□□□ -2.08
LSM3P62310 DPPA3P1-201ENST00000448050 469 ntBASIC2.06□□□□□ -2.08
LSM3P62310 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.06□□□□□ -2.08
LSM3P62310 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.06□□□□□ -2.08
LSM3P62310 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.06□□□□□ -2.08
LSM3P62310 AC096725.1-201ENST00000514266 313 ntBASIC2.06□□□□□ -2.08
LSM3P62310 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.06□□□□□ -2.08
LSM3P62310 EIF4EP5-201ENST00000528228 640 ntBASIC2.06□□□□□ -2.08
LSM3P62310 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
LSM3P62310 AC007115.1-201ENST00000546853 234 ntBASIC2.06□□□□□ -2.08
LSM3P62310 NBEAP1-201ENST00000554452 979 ntBASIC2.06□□□□□ -2.08
LSM3P62310 AL391156.1-201ENST00000554965 554 ntBASIC2.06□□□□□ -2.08
LSM3P62310 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.06□□□□□ -2.08
LSM3P62310 NUTF2P8-201ENST00000604593 363 ntBASIC2.06□□□□□ -2.08
LSM3P62310 AC135178.6-201ENST00000605314 398 ntBASIC2.06□□□□□ -2.08
LSM3P62310 AC117490.2-201ENST00000610042 594 ntBASIC2.06□□□□□ -2.08
LSM3P62310 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.06□□□□□ -2.08
LSM3P62310 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LSM3P62310 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.06□□□□□ -2.08
LSM3P62310 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LSM3P62310 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
LSM3P62310 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.06□□□□□ -2.08
LSM3P62310 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LSM3P62310 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 RNU6-799P-201ENST00000363567 107 ntBASIC2.05□□□□□ -2.08
LSM3P62310 RNU6-374P-201ENST00000364146 108 ntBASIC2.05□□□□□ -2.08
LSM3P62310 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
LSM3P62310 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 RNVU1-14-201ENST00000384770 164 ntBASIC2.05□□□□□ -2.08
LSM3P62310 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LSM3P62310 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.05□□□□□ -2.08
LSM3P62310 RNU4-65P-201ENST00000410473 140 ntBASIC2.05□□□□□ -2.08
LSM3P62310 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LSM3P62310 RPL36AP36-201ENST00000418616 301 ntBASIC2.05□□□□□ -2.08
LSM3P62310 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 AL671855.1-201ENST00000446875 1203 ntBASIC2.05□□□□□ -2.08
LSM3P62310 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.05□□□□□ -2.08
LSM3P62310 AC023424.2-201ENST00000493479 777 ntBASIC2.05□□□□□ -2.08
LSM3P62310 CEACAMP10-202ENST00000495431 496 ntBASIC2.05□□□□□ -2.08
LSM3P62310 AC009901.1-201ENST00000506703 541 ntBASIC2.05□□□□□ -2.08
LSM3P62310 AC010625.1-201ENST00000511296 403 ntBASIC2.05□□□□□ -2.08
LSM3P62310 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.05□□□□□ -2.08
LSM3P62310 RN7SKP24-201ENST00000515888 284 ntBASIC2.05□□□□□ -2.08
LSM3P62310 RNA5SP341-201ENST00000516261 117 ntBASIC2.05□□□□□ -2.08
LSM3P62310 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LSM3P62310 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.05□□□□□ -2.08
LSM3P62310 AC020895.1-201ENST00000595362 272 ntBASIC2.05□□□□□ -2.08
LSM3P62310 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.05□□□□□ -2.08
LSM3P62310 AL161734.1-201ENST00000609720 557 ntBASIC2.05□□□□□ -2.08
LSM3P62310 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LSM3P62310 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM3P62310 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LSM3P62310 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.05□□□□□ -2.08
LSM3P62310 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LSM3P62310 AL139276.1-201ENST00000311910 1001 ntBASIC2.04□□□□□ -2.08
LSM3P62310 RNU6-1180P-201ENST00000364935 107 ntBASIC2.04□□□□□ -2.08
LSM3P62310 MIR9-1-201ENST00000385198 89 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC025750.1-201ENST00000399891 379 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AL606495.1-201ENST00000422100 813 ntBASIC2.04□□□□□ -2.08
LSM3P62310 MTND4P31-201ENST00000425607 1343 ntBASIC2.04□□□□□ -2.08
LSM3P62310 SRIP2-201ENST00000428470 166 ntBASIC2.04□□□□□ -2.08
LSM3P62310 FCF1P1-201ENST00000432690 571 ntBASIC2.04□□□□□ -2.08
LSM3P62310 YWHAZP8-201ENST00000436935 731 ntBASIC2.04□□□□□ -2.08
LSM3P62310 RPL23AP7-203ENST00000449021 469 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 snoU13.4-201ENST00000458916 104 ntBASIC2.04□□□□□ -2.08
LSM3P62310 RNA5SP310-201ENST00000459084 116 ntBASIC2.04□□□□□ -2.08
LSM3P62310 snoU13.3-201ENST00000459441 104 ntBASIC2.04□□□□□ -2.08
LSM3P62310 RN7SL807P-201ENST00000470923 297 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 RPL36AP51-201ENST00000487216 318 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC021087.2-201ENST00000504656 1203 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 AC026436.1-201ENST00000510537 270 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC008494.2-201ENST00000514544 370 ntBASIC2.04□□□□□ -2.08
LSM3P62310 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 DUXAP2-201ENST00000519198 589 ntBASIC2.04□□□□□ -2.08
LSM3P62310 ERHP1-201ENST00000523006 310 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC087373.1-201ENST00000524920 491 ntBASIC2.04□□□□□ -2.08
LSM3P62310 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.04□□□□□ -2.08
LSM3P62310 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LSM3P62310 CKS1BP1-201ENST00000555221 240 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.04□□□□□ -2.08
LSM3P62310 AC023158.1-201ENST00000561632 1025 ntBASIC2.04□□□□□ -2.08
LSM3P62310 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM3P62310 AC087481.2-201ENST00000565492 330 ntBASIC2.04□□□□□ -2.08
LSM3P62310 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms