Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.19□□□□□ -1.74
SUMO3P55854 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.19□□□□□ -1.74
SUMO3P55854 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.19□□□□□ -1.74
SUMO3P55854 AC026801.2-201ENST00000515352 425 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 RNA5SP360-201ENST00000516555 118 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.19□□□□□ -1.74
SUMO3P55854 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.19□□□□□ -1.74
SUMO3P55854 AC022616.3-201ENST00000523940 148 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AC011979.2-201ENST00000527568 352 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AP003072.2-201ENST00000527756 676 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 FAM92A1P1-201ENST00000528023 890 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.19□□□□□ -1.74
SUMO3P55854 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 AC091178.1-203ENST00000584586 279 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.19□□□□□ -1.74
SUMO3P55854 AF250324.2-201ENST00000608299 610 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AL590282.1-201ENST00000610379 1136 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AL161616.1-201ENST00000611867 286 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 MLECP1-201ENST00000615893 709 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AC006338.1-201ENST00000618453 749 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AL353748.2-201ENST00000622148 471 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AC243312.2-201ENST00000623340 601 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AL160394.1-201ENST00000624765 724 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SUMO3P55854 SALL4P2-201ENST00000423288 2910 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SUMO3P55854 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SUMO3P55854 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SUMO3P55854 AC010928.1-201ENST00000592477 1447 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SUMO3P55854 DDX10P1-201ENST00000448545 1933 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 AP001642.1-201ENST00000624727 2117 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 RNU6-169P-201ENST00000365336 107 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 RNU6-882P-201ENST00000391025 103 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SUMO3P55854 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 RNU4-55P-201ENST00000410731 137 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.18□□□□□ -1.74
SUMO3P55854 AC007283.2-201ENST00000424739 197 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.18□□□□□ -1.74
SUMO3P55854 NPM1P49-201ENST00000448027 714 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 FABP3P2-201ENST00000453169 399 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 RPL36AP13-201ENST00000457490 317 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC023598.1-201ENST00000472521 361 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC078817.1-201ENST00000492623 435 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC068305.1-201ENST00000497406 726 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 HMGB1P22-201ENST00000505315 124 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.18□□□□□ -1.74
SUMO3P55854 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.18□□□□□ -1.74
SUMO3P55854 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.18□□□□□ -1.74
SUMO3P55854 SNORA31.20-201ENST00000517111 133 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 AC022882.1-201ENST00000532142 501 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.18□□□□□ -1.74
SUMO3P55854 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 BNIP3P5-201ENST00000562290 498 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.18□□□□□ -1.74
SUMO3P55854 AC007448.1-201ENST00000582714 234 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 BNIP3P33-201ENST00000598912 569 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AL034351.1-201ENST00000605288 668 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC008966.2-201ENST00000606157 453 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 AL450472.3-201ENST00000615578 367 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC100827.5-201ENST00000615883 426 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC015967.1-201ENST00000619893 476 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC091905.1-201ENST00000624400 311 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 MIR4275-201ENST00000636486 87 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 LRRC77P-213ENST00000637727 880 ntBASIC4.18□□□□□ -1.74
SUMO3P55854 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SUMO3P55854 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.18□□□□□ -1.74
SUMO3P55854 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.18□□□□□ -1.74
SUMO3P55854 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SUMO3P55854 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SUMO3P55854 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms