Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MTCO2P31-201ENST00000402702 684 ntBASIC3.58□□□□□ -1.84
VCPP55072 SFR1P1-201ENST00000403720 688 ntBASIC3.58□□□□□ -1.84
VCPP55072 SFR1P2-201ENST00000421841 730 ntBASIC3.58□□□□□ -1.84
VCPP55072 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.58□□□□□ -1.84
VCPP55072 RPL23AP82-202ENST00000427528 469 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.58□□□□□ -1.84
VCPP55072 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
VCPP55072 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.58□□□□□ -1.84
VCPP55072 PTGES3P5-201ENST00000455109 434 ntBASIC3.58□□□□□ -1.84
VCPP55072 CENPBD1P1-201ENST00000464061 469 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC087312.1-201ENST00000471411 480 ntBASIC3.58□□□□□ -1.84
VCPP55072 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.58□□□□□ -1.84
VCPP55072 RPS3AP43-201ENST00000479743 781 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC006445.1-201ENST00000491925 405 ntBASIC3.58□□□□□ -1.84
VCPP55072 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.58□□□□□ -1.84
VCPP55072 HMGB1P22-201ENST00000505315 124 ntBASIC3.58□□□□□ -1.84
VCPP55072 MTCO2P32-201ENST00000514865 403 ntBASIC3.58□□□□□ -1.84
VCPP55072 RN7SKP116-201ENST00000516902 319 ntBASIC3.58□□□□□ -1.84
VCPP55072 snoZ278.1-201ENST00000517059 112 ntBASIC3.58□□□□□ -1.84
VCPP55072 IGKV2-26-201ENST00000518305 343 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC093331.1-201ENST00000521474 169 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC010376.1-201ENST00000522101 334 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC087276.1-201ENST00000529659 480 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC022080.3-201ENST00000544433 482 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.58□□□□□ -1.84
VCPP55072 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.58□□□□□ -1.84
VCPP55072 AP001542.2-201ENST00000593141 364 ntBASIC3.58□□□□□ -1.84
VCPP55072 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VCPP55072 AC104763.2-201ENST00000604179 382 ntBASIC3.58□□□□□ -1.84
VCPP55072 AC124312.4-201ENST00000605533 310 ntBASIC3.58□□□□□ -1.84
VCPP55072 AL590282.1-201ENST00000610379 1136 ntBASIC3.58□□□□□ -1.84
VCPP55072 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.58□□□□□ -1.84
VCPP55072 AL645568.2-201ENST00000432815 1337 ntBASIC3.58□□□□□ -1.84
VCPP55072 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VCPP55072 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VCPP55072 ZNF826P-207ENST00000622273 1910 ntBASIC3.58□□□□□ -1.84
VCPP55072 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VCPP55072 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VCPP55072 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCPP55072 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCPP55072 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCPP55072 MIR422A-201ENST00000362286 90 ntBASIC3.57□□□□□ -1.84
VCPP55072 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCPP55072 Y_RNA.493-201ENST00000384422 102 ntBASIC3.57□□□□□ -1.84
VCPP55072 SSXP10-201ENST00000402595 565 ntBASIC3.57□□□□□ -1.84
VCPP55072 AL357075.1-201ENST00000404107 726 ntBASIC3.57□□□□□ -1.84
VCPP55072 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.57□□□□□ -1.84
VCPP55072 RNA5SP31-201ENST00000411144 127 ntBASIC3.57□□□□□ -1.84
VCPP55072 RNU6-575P-201ENST00000411326 105 ntBASIC3.57□□□□□ -1.84
VCPP55072 BTF3P8-201ENST00000414577 526 ntBASIC3.57□□□□□ -1.84
VCPP55072 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.57□□□□□ -1.84
VCPP55072 AC027644.1-201ENST00000419595 298 ntBASIC3.57□□□□□ -1.84
VCPP55072 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.57□□□□□ -1.84
VCPP55072 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.57□□□□□ -1.84
VCPP55072 AC010881.1-201ENST00000433830 235 ntBASIC3.57□□□□□ -1.84
VCPP55072 PTGES3P1-201ENST00000439531 483 ntBASIC3.57□□□□□ -1.84
VCPP55072 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.57□□□□□ -1.84
VCPP55072 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.57□□□□□ -1.84
VCPP55072 NECAP1P2-201ENST00000455668 727 ntBASIC3.57□□□□□ -1.84
VCPP55072 RPS15AP1-201ENST00000457423 391 ntBASIC3.57□□□□□ -1.84
VCPP55072 ZNF542P-204ENST00000482727 1305 ntBASIC3.57□□□□□ -1.84
VCPP55072 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VCPP55072 AC119751.4-201ENST00000507498 357 ntBASIC3.57□□□□□ -1.84
VCPP55072 RNU6-1028P-201ENST00000517164 93 ntBASIC3.57□□□□□ -1.84
VCPP55072 AC107934.2-201ENST00000518653 310 ntBASIC3.57□□□□□ -1.84
VCPP55072 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.57□□□□□ -1.84
VCPP55072 NDUFS5P6-201ENST00000529136 295 ntBASIC3.57□□□□□ -1.84
VCPP55072 AL121603.1-201ENST00000553815 142 ntBASIC3.57□□□□□ -1.84
VCPP55072 AL163153.1-201ENST00000554223 283 ntBASIC3.57□□□□□ -1.84
VCPP55072 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.57□□□□□ -1.84
VCPP55072 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.57□□□□□ -1.84
VCPP55072 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.57□□□□□ -1.84
VCPP55072 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VCPP55072 AC090330.1-201ENST00000588646 764 ntBASIC3.57□□□□□ -1.84
VCPP55072 AC067852.3-201ENST00000589177 561 ntBASIC3.57□□□□□ -1.84
VCPP55072 AL022067.1-201ENST00000602426 454 ntBASIC3.57□□□□□ -1.84
VCPP55072 AC144521.1-201ENST00000607148 956 ntBASIC3.57□□□□□ -1.84
VCPP55072 AC138932.5-201ENST00000617759 563 ntBASIC3.57□□□□□ -1.84
VCPP55072 AL391262.2-201ENST00000622466 494 ntBASIC3.57□□□□□ -1.84
VCPP55072 AL445984.1-201ENST00000637834 659 ntBASIC3.57□□□□□ -1.84
VCPP55072 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCPP55072 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VCPP55072 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VCPP55072 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VCPP55072 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VCPP55072 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VCPP55072 RNU1-75P-201ENST00000347264 129 ntBASIC3.56□□□□□ -1.84
VCPP55072 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VCPP55072 RNU6-925P-201ENST00000384629 104 ntBASIC3.56□□□□□ -1.84
VCPP55072 MIR122-201ENST00000385044 85 ntBASIC3.56□□□□□ -1.84
VCPP55072 AL583834.1-201ENST00000406943 343 ntBASIC3.56□□□□□ -1.84
VCPP55072 MIR1261-201ENST00000408659 82 ntBASIC3.56□□□□□ -1.84
VCPP55072 RNA5SP129-201ENST00000410276 118 ntBASIC3.56□□□□□ -1.84
VCPP55072 RNU4-78P-201ENST00000410940 126 ntBASIC3.56□□□□□ -1.84
VCPP55072 RPS7P9-201ENST00000414704 586 ntBASIC3.56□□□□□ -1.84
VCPP55072 GLRXP1-201ENST00000423261 334 ntBASIC3.56□□□□□ -1.84
VCPP55072 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.56□□□□□ -1.84
VCPP55072 HMGN2P20-201ENST00000437531 273 ntBASIC3.56□□□□□ -1.84
VCPP55072 AC107083.1-201ENST00000439643 279 ntBASIC3.56□□□□□ -1.84
VCPP55072 AC097262.1-201ENST00000452559 548 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms