Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.79□□□□□ -1.8
LIMK1P53667 MTCYBP17-201ENST00000503579 789 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AC091951.3-201ENST00000504093 246 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AC004062.1-201ENST00000509926 645 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.79□□□□□ -1.8
LIMK1P53667 RNU6-583P-201ENST00000516012 92 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
LIMK1P53667 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.79□□□□□ -1.8
LIMK1P53667 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK1P53667 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.79□□□□□ -1.8
LIMK1P53667 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.79□□□□□ -1.8
LIMK1P53667 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK1P53667 AC010198.2-201ENST00000550612 259 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 NBEAP1-201ENST00000554452 979 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.79□□□□□ -1.8
LIMK1P53667 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.79□□□□□ -1.8
LIMK1P53667 RPL23AP87-202ENST00000573039 466 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 LARP7P2-201ENST00000575306 125 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 MAGOH2P-202ENST00000584384 429 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.79□□□□□ -1.8
LIMK1P53667 AC061975.8-201ENST00000587058 721 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 BNIP3P24-201ENST00000593398 557 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AC006329.2-201ENST00000611491 394 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AL390240.1-201ENST00000612950 384 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.79□□□□□ -1.8
LIMK1P53667 AC231657.1-201ENST00000624313 397 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
LIMK1P53667 CR381572.1-201ENST00000625098 102 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.79□□□□□ -1.8
LIMK1P53667 MIR1322-201ENST00000638013 71 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK1P53667 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK1P53667 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
LIMK1P53667 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK1P53667 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LIMK1P53667 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK1P53667 ZNF876P-202ENST00000398732 1485 ntBASIC3.79□□□□□ -1.8
LIMK1P53667 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK1P53667 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LIMK1P53667 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.78□□□□□ -1.8
LIMK1P53667 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LIMK1P53667 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LIMK1P53667 RNA5SP51-201ENST00000364750 119 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 RNU6-730P-201ENST00000383954 104 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LIMK1P53667 AL122016.1-201ENST00000403365 367 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AC068533.2-201ENST00000411872 306 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.78□□□□□ -1.8
LIMK1P53667 HMGB3P23-201ENST00000414981 585 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 FNDC3CP-201ENST00000420795 1155 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AC012065.2-201ENST00000421295 375 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AL139421.1-201ENST00000423010 169 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AL049610.1-201ENST00000423374 372 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 MTCO2P17-201ENST00000424336 677 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 USP9YP11-201ENST00000427537 717 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.78□□□□□ -1.8
LIMK1P53667 MRPS18BP2-201ENST00000434310 759 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 FGF7P5-201ENST00000441829 291 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 AC073387.1-201ENST00000453261 709 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 snoU13.4-201ENST00000458916 104 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.78□□□□□ -1.8
LIMK1P53667 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.78□□□□□ -1.8
LIMK1P53667 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LIMK1P53667 FAM172BP-201ENST00000487497 1089 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AC079395.1-201ENST00000510981 262 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AP001372.4-201ENST00000524889 472 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 AL451044.1-201ENST00000604867 238 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.78□□□□□ -1.8
LIMK1P53667 AC090246.1-201ENST00000616499 426 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.78□□□□□ -1.8
LIMK1P53667 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 MTCO1P23-201ENST00000415223 1526 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.78□□□□□ -1.8
LIMK1P53667 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.78□□□□□ -1.8
LIMK1P53667 NUP58P1-201ENST00000502546 1738 ntBASIC3.78□□□□□ -1.8
LIMK1P53667 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LIMK1P53667 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LIMK1P53667 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK1P53667 MIR128-1-201ENST00000384921 82 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 U3.26-201ENST00000391236 204 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 HMGN2P8-201ENST00000391458 268 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMK1P53667 RN7SKP56-201ENST00000410513 331 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms