Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNA5SP391-201ENST00000363456 119 ntBASIC4.34□□□□□ -1.71
COPB1P53618 SNORA51.6-201ENST00000384151 125 ntBASIC4.34□□□□□ -1.71
COPB1P53618 HMGN2P8-201ENST00000391458 268 ntBASIC4.34□□□□□ -1.71
COPB1P53618 RN7SKP266-201ENST00000410232 287 ntBASIC4.34□□□□□ -1.71
COPB1P53618 RPL7AP73-201ENST00000413490 353 ntBASIC4.34□□□□□ -1.71
COPB1P53618 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.34□□□□□ -1.71
COPB1P53618 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COPB1P53618 AL356583.2-201ENST00000426536 280 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.34□□□□□ -1.71
COPB1P53618 RPS20P1-201ENST00000434853 354 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.34□□□□□ -1.71
COPB1P53618 AC091862.1-201ENST00000438016 1100 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.34□□□□□ -1.71
COPB1P53618 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.34□□□□□ -1.71
COPB1P53618 RPS26P56-201ENST00000444468 240 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.34□□□□□ -1.71
COPB1P53618 NANOGNBP1-201ENST00000448444 480 ntBASIC4.34□□□□□ -1.71
COPB1P53618 RPL7P31-201ENST00000450192 724 ntBASIC4.34□□□□□ -1.71
COPB1P53618 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.34□□□□□ -1.71
COPB1P53618 SNRPFP4-201ENST00000456366 242 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC026410.2-201ENST00000460281 156 ntBASIC4.34□□□□□ -1.71
COPB1P53618 LARP1BP2-201ENST00000486594 519 ntBASIC4.34□□□□□ -1.71
COPB1P53618 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.34□□□□□ -1.71
COPB1P53618 FTH1P24-201ENST00000503502 462 ntBASIC4.34□□□□□ -1.71
COPB1P53618 RN7SKP298-201ENST00000515950 94 ntBASIC4.34□□□□□ -1.71
COPB1P53618 PAICSP4-201ENST00000517543 1253 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.34□□□□□ -1.71
COPB1P53618 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.34□□□□□ -1.71
COPB1P53618 AC090281.1-201ENST00000523019 276 ntBASIC4.34□□□□□ -1.71
COPB1P53618 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COPB1P53618 AP002453.2-201ENST00000533503 320 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.34□□□□□ -1.71
COPB1P53618 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.34□□□□□ -1.71
COPB1P53618 ZNF519P3-201ENST00000557158 1032 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC136619.2-201ENST00000563361 631 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AL133457.1-201ENST00000564251 987 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.34□□□□□ -1.71
COPB1P53618 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.34□□□□□ -1.71
COPB1P53618 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.34□□□□□ -1.71
COPB1P53618 PRELID3BP8-201ENST00000604148 295 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC010857.1-201ENST00000606398 594 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.34□□□□□ -1.71
COPB1P53618 AC126118.1-201ENST00000607744 628 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC007684.1-201ENST00000609671 477 ntBASIC4.34□□□□□ -1.71
COPB1P53618 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.34□□□□□ -1.71
COPB1P53618 MIR6868-201ENST00000611215 58 ntBASIC4.34□□□□□ -1.71
COPB1P53618 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.34□□□□□ -1.71
COPB1P53618 MIR6715B-201ENST00000637172 77 ntBASIC4.34□□□□□ -1.71
COPB1P53618 U6.101-201ENST00000637707 76 ntBASIC4.34□□□□□ -1.71
COPB1P53618 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COPB1P53618 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COPB1P53618 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COPB1P53618 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
COPB1P53618 AC006378.2-201ENST00000623178 2476 ntBASIC4.34□□□□□ -1.72
COPB1P53618 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
COPB1P53618 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.34□□□□□ -1.72
COPB1P53618 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COPB1P53618 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COPB1P53618 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COPB1P53618 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COPB1P53618 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.33□□□□□ -1.72
COPB1P53618 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
COPB1P53618 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COPB1P53618 NCAPGP1-201ENST00000505112 1814 ntBASIC4.33□□□□□ -1.72
COPB1P53618 MTND5P26-201ENST00000426018 1752 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AC027287.1-201ENST00000553115 1453 ntBASIC4.33□□□□□ -1.72
COPB1P53618 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.33□□□□□ -1.72
COPB1P53618 U8.14-201ENST00000390843 143 ntBASIC4.33□□□□□ -1.72
COPB1P53618 Y_RNA.582-201ENST00000391023 95 ntBASIC4.33□□□□□ -1.72
COPB1P53618 RNU6-952P-201ENST00000391164 108 ntBASIC4.33□□□□□ -1.72
COPB1P53618 RPS26P8-201ENST00000393490 348 ntBASIC4.33□□□□□ -1.72
COPB1P53618 DHFRP6-201ENST00000401776 268 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.33□□□□□ -1.72
COPB1P53618 TPMTP2-201ENST00000414372 726 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.33□□□□□ -1.72
COPB1P53618 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.33□□□□□ -1.72
COPB1P53618 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.33□□□□□ -1.72
COPB1P53618 AL445669.1-201ENST00000426743 755 ntBASIC4.33□□□□□ -1.72
COPB1P53618 RPS26P47-201ENST00000427219 348 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AC109583.1-201ENST00000432156 268 ntBASIC4.33□□□□□ -1.72
COPB1P53618 SNRPEP7-201ENST00000438350 220 ntBASIC4.33□□□□□ -1.72
COPB1P53618 MTND5P14-201ENST00000441481 1267 ntBASIC4.33□□□□□ -1.72
COPB1P53618 ARPC3P5-201ENST00000448802 534 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.33□□□□□ -1.72
COPB1P53618 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.33□□□□□ -1.72
COPB1P53618 RPS11P1-201ENST00000451072 473 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.33□□□□□ -1.72
COPB1P53618 RPL31P50-201ENST00000471002 296 ntBASIC4.33□□□□□ -1.72
COPB1P53618 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
COPB1P53618 AC023424.2-201ENST00000493479 777 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.33□□□□□ -1.72
COPB1P53618 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.33□□□□□ -1.72
COPB1P53618 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.33□□□□□ -1.72
COPB1P53618 SNORA31.9-201ENST00000516429 84 ntBASIC4.33□□□□□ -1.72
COPB1P53618 HSPA8P13-201ENST00000523715 472 ntBASIC4.33□□□□□ -1.72
COPB1P53618 MTCYBP41-201ENST00000528913 1123 ntBASIC4.33□□□□□ -1.72
COPB1P53618 ZNF705CP-201ENST00000530515 889 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AC013828.2-201ENST00000532487 235 ntBASIC4.33□□□□□ -1.72
COPB1P53618 CCNG2P1-201ENST00000549521 1000 ntBASIC4.33□□□□□ -1.72
COPB1P53618 EEF1B2P4-201ENST00000551398 348 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms