Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NEK3P51956 AC010733.2-201ENST00000589496 5702 ntBASIC4.42□□□□□ -1.7
NEK3P51956 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEK3P51956 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.42□□□□□ -1.7
NEK3P51956 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NEK3P51956 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NEK3P51956 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
NEK3P51956 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NEK3P51956 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NEK3P51956 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NEK3P51956 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEK3P51956 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEK3P51956 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEK3P51956 RNU5E-5P-201ENST00000365379 116 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.41□□□□□ -1.7
NEK3P51956 HMGN1P24-201ENST00000412282 298 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.41□□□□□ -1.7
NEK3P51956 RPL23AP26-201ENST00000412728 464 ntBASIC4.41□□□□□ -1.7
NEK3P51956 SEPT2P1-201ENST00000419651 180 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AC092017.2-201ENST00000427600 362 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AL132765.1-201ENST00000434165 553 ntBASIC4.41□□□□□ -1.7
NEK3P51956 HMGB1P12-201ENST00000438594 598 ntBASIC4.41□□□□□ -1.7
NEK3P51956 RPL23AP31-201ENST00000456160 467 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.41□□□□□ -1.7
NEK3P51956 AC139783.2-201ENST00000504847 1145 ntBASIC4.41□□□□□ -1.7
NEK3P51956 VN1R104P-201ENST00000505115 1009 ntBASIC4.41□□□□□ -1.7
NEK3P51956 PARP4P3-201ENST00000510265 317 ntBASIC4.41□□□□□ -1.7
NEK3P51956 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.41□□□□□ -1.7
NEK3P51956 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.41□□□□□ -1.7
NEK3P51956 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.41□□□□□ -1.7
NEK3P51956 RNA5SP468-201ENST00000516782 93 ntBASIC4.41□□□□□ -1.7
NEK3P51956 OR5M7P-201ENST00000526140 972 ntBASIC4.41□□□□□ -1.7
NEK3P51956 SNRPGP16-201ENST00000533275 226 ntBASIC4.41□□□□□ -1.7
NEK3P51956 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.41□□□□□ -1.7
NEK3P51956 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.41□□□□□ -1.7
NEK3P51956 AC012065.4-201ENST00000602445 679 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AC068276.1-201ENST00000605793 379 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AL158063.1-201ENST00000615349 536 ntBASIC4.41□□□□□ -1.7
NEK3P51956 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AC019278.1-201ENST00000623516 479 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AC048347.1-201ENST00000624621 427 ntBASIC4.41□□□□□ -1.7
NEK3P51956 AL159972.1-201ENST00000625150 448 ntBASIC4.41□□□□□ -1.7
NEK3P51956 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.41□□□□□ -1.7
NEK3P51956 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEK3P51956 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.41□□□□□ -1.7
NEK3P51956 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.41□□□□□ -1.7
NEK3P51956 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEK3P51956 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEK3P51956 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.41□□□□□ -1.7
NEK3P51956 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEK3P51956 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
NEK3P51956 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.41□□□□□ -1.7
NEK3P51956 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
NEK3P51956 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEK3P51956 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.41□□□□□ -1.7
NEK3P51956 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
NEK3P51956 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
NEK3P51956 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.4□□□□□ -1.7
NEK3P51956 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NEK3P51956 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NEK3P51956 RNA5SP366-201ENST00000365454 123 ntBASIC4.4□□□□□ -1.71
NEK3P51956 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.4□□□□□ -1.71
NEK3P51956 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NEK3P51956 RPL23AP48-201ENST00000406913 488 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AL603766.1-201ENST00000407763 664 ntBASIC4.4□□□□□ -1.71
NEK3P51956 RNU6-516P-201ENST00000411381 104 ntBASIC4.4□□□□□ -1.71
NEK3P51956 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.4□□□□□ -1.71
NEK3P51956 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.4□□□□□ -1.71
NEK3P51956 AL139095.3-201ENST00000419672 1203 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AL365338.1-201ENST00000422282 858 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.4□□□□□ -1.71
NEK3P51956 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.4□□□□□ -1.71
NEK3P51956 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.4□□□□□ -1.71
NEK3P51956 AL359073.1-201ENST00000448036 403 ntBASIC4.4□□□□□ -1.71
NEK3P51956 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 RPL5P32-201ENST00000454085 879 ntBASIC4.4□□□□□ -1.71
NEK3P51956 FGF7P3-201ENST00000454645 303 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC007967.1-201ENST00000455422 1159 ntBASIC4.4□□□□□ -1.71
NEK3P51956 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.4□□□□□ -1.71
NEK3P51956 UQCRHP4-201ENST00000471686 272 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 AP001086.1-201ENST00000494882 321 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.4□□□□□ -1.71
NEK3P51956 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 MTCO2P32-201ENST00000514865 403 ntBASIC4.4□□□□□ -1.71
NEK3P51956 FABP5P5-201ENST00000515537 406 ntBASIC4.4□□□□□ -1.71
NEK3P51956 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NEK3P51956 SNORA31.8-201ENST00000516327 108 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 TOMM20P2-201ENST00000540082 421 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.4□□□□□ -1.71
NEK3P51956 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms