Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL365503.1-201ENST00000605247 905 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
BRCC3P46736 RMST_8.1-201ENST00000610287 165 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.44□□□□□ -1.86
BRCC3P46736 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.44□□□□□ -1.86
BRCC3P46736 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.44□□□□□ -1.86
BRCC3P46736 AC018816.2-201ENST00000621460 353 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.44□□□□□ -1.86
BRCC3P46736 AC138649.5-201ENST00000637456 137 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 ZNF663P-202ENST00000641770 1131 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 LINC02211-204ENST00000642024 1070 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
BRCC3P46736 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
BRCC3P46736 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
BRCC3P46736 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BRCC3P46736 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BRCC3P46736 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
BRCC3P46736 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
BRCC3P46736 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.43□□□□□ -1.86
BRCC3P46736 RNU6-251P-201ENST00000363235 104 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 RNU6-839P-201ENST00000363347 108 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 SNORD116.1-201ENST00000365628 92 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.43□□□□□ -1.86
BRCC3P46736 Y_RNA.408-201ENST00000383987 102 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 SNORD116-23-201ENST00000384645 92 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 MIR649-201ENST00000384843 97 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 SSXP10-201ENST00000402595 565 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AL136310.1-201ENST00000404926 654 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.43□□□□□ -1.86
BRCC3P46736 MIR1250-201ENST00000408098 113 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC007390.1-201ENST00000415722 356 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 OFD1P18Y-201ENST00000420889 959 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 RPL23AP69-201ENST00000431134 458 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.43□□□□□ -1.86
BRCC3P46736 CKS1BP5-201ENST00000434172 273 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 USP9YP24-201ENST00000434374 697 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.43□□□□□ -1.86
BRCC3P46736 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 USP9YP17-201ENST00000444617 696 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 HMGB3P6-201ENST00000444896 598 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC079776.3-201ENST00000450665 370 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 RPS20P32-201ENST00000456044 356 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 HMGB3P30-201ENST00000457863 606 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC005410.1-202ENST00000460347 485 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 PCBP2P3-201ENST00000509726 843 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.43□□□□□ -1.86
BRCC3P46736 AP000790.1-201ENST00000528891 737 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.43□□□□□ -1.86
BRCC3P46736 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BRCC3P46736 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 MTATP6P24-201ENST00000576835 677 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC006270.2-201ENST00000578523 652 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 UBL5P2-201ENST00000583788 219 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC068722.2-201ENST00000618734 544 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC110801.1-201ENST00000623590 212 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AC098679.5-201ENST00000624394 571 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.43□□□□□ -1.86
BRCC3P46736 AC087821.2-201ENST00000637086 450 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 AP005901.5-201ENST00000545779 1796 ntBASIC3.43□□□□□ -1.86
BRCC3P46736 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
BRCC3P46736 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.43□□□□□ -1.86
BRCC3P46736 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRCC3P46736 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.42□□□□□ -1.86
BRCC3P46736 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
BRCC3P46736 RNU6-582P-201ENST00000362989 107 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 RNU6-115P-201ENST00000364310 107 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AL513175.2-201ENST00000422071 443 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AL049610.1-201ENST00000423374 372 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.42□□□□□ -1.86
BRCC3P46736 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.42□□□□□ -1.86
BRCC3P46736 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.42□□□□□ -1.86
BRCC3P46736 AC093155.1-201ENST00000440164 826 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.42□□□□□ -1.86
BRCC3P46736 OFD1P3Y-201ENST00000453312 783 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.42□□□□□ -1.86
BRCC3P46736 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.42□□□□□ -1.86
BRCC3P46736 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.42□□□□□ -1.86
BRCC3P46736 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BRCC3P46736 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.42□□□□□ -1.86
BRCC3P46736 RNU2-58P-201ENST00000516403 183 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.42□□□□□ -1.86
BRCC3P46736 OR4A45P-201ENST00000529954 901 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.42□□□□□ -1.86
BRCC3P46736 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms