Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC093853.1-201ENST00000515689 483 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN9P43378 OR6C7P-201ENST00000547875 934 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC107016.1-201ENST00000550463 337 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.06□□□□□ -1.76
PTPN9P43378 AC023161.2-201ENST00000551218 780 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPN9P43378 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.06□□□□□ -1.76
PTPN9P43378 AC007224.1-201ENST00000564410 144 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC091489.2-201ENST00000566263 604 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.06□□□□□ -1.76
PTPN9P43378 AC120057.2-201ENST00000571520 271 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPN9P43378 LLPHP1-201ENST00000603571 367 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC012557.2-201ENST00000605919 418 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 RNA5SP108-201ENST00000605921 117 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC025594.3-201ENST00000613068 790 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN9P43378 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN9P43378 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN9P43378 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN9P43378 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN9P43378 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN9P43378 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PTPN9P43378 NMD3P1-201ENST00000439704 1488 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN9P43378 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN9P43378 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN9P43378 MTND4P4-201ENST00000439033 1366 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN9P43378 XIAPP3-201ENST00000312918 795 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN9P43378 RNU6-356P-201ENST00000384140 107 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PTPN9P43378 AL355379.1-201ENST00000405542 640 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 MTCYBP24-201ENST00000420387 1106 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPN9P43378 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN9P43378 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.05□□□□□ -1.76
PTPN9P43378 AL590399.6-201ENST00000446396 307 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 AL500522.2-201ENST00000448562 343 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 PPIAP3-201ENST00000450588 505 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 BX322784.1-201ENST00000455793 1077 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 AC069499.1-201ENST00000489433 509 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 AC010424.1-201ENST00000506336 297 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 MTND4P2-201ENST00000507767 1203 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 TXNP6-201ENST00000510190 310 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 MTCO3P44-201ENST00000510977 541 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.05□□□□□ -1.76
PTPN9P43378 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN9P43378 AC093677.1-201ENST00000514414 678 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 MIR2114-201ENST00000516645 80 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN9P43378 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN9P43378 GTF2IP22-201ENST00000554443 182 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN9P43378 AC090877.1-201ENST00000561418 344 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 AC083760.1-201ENST00000589621 670 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 AC073544.2-201ENST00000601155 540 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN9P43378 AC006378.2-201ENST00000623178 2476 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN9P43378 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN9P43378 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PTPN9P43378 AL136964.1-201ENST00000622038 2990 ntBASIC4.05□□□□□ -1.76
PTPN9P43378 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PTPN9P43378 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPN9P43378 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN9P43378 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 MAPK10-373ENST00000641983 6772 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 MTND4P16-201ENST00000466108 1367 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPN9P43378 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPN9P43378 PABPC1P9-201ENST00000426076 1612 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN9P43378 U3.4-201ENST00000363352 213 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 RNU6-777P-201ENST00000364265 104 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 RNVU1-3-201ENST00000364313 161 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 RNA5SP97-201ENST00000365006 84 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 RNA5SP283-201ENST00000365604 119 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 Y_RNA.436-201ENST00000384097 102 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN9P43378 RPL17P12-201ENST00000413391 526 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms