Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC012314.7-201ENST00000619693 93 ntBASIC3.05□□□□□ -1.92
SLC1A1P43005 MIR6075-201ENST00000620782 95 ntBASIC3.05□□□□□ -1.92
SLC1A1P43005 AC091953.5-201ENST00000622919 233 ntBASIC3.05□□□□□ -1.92
SLC1A1P43005 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.05□□□□□ -1.92
SLC1A1P43005 AC009039.2-201ENST00000624524 529 ntBASIC3.05□□□□□ -1.92
SLC1A1P43005 CR381572.1-201ENST00000625098 102 ntBASIC3.05□□□□□ -1.92
SLC1A1P43005 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC1A1P43005 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC1A1P43005 ZNF849P-201ENST00000594711 1566 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC1A1P43005 AC096644.4-201ENST00000563417 2912 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC1A1P43005 AC004925.1-201ENST00000624256 2706 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 SNORA71.3-201ENST00000362582 128 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 RNU6-1249P-201ENST00000363237 111 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC1A1P43005 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 MIR181B1-201ENST00000385240 110 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 MIR670-201ENST00000390142 98 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AP002784.2-201ENST00000397300 549 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC1A1P43005 RPL7P10-201ENST00000417407 739 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC1A1P43005 AC004022.1-201ENST00000447766 1066 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC1A1P43005 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC1A1P43005 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC1A1P43005 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC1A1P43005 AC004062.1-201ENST00000509926 645 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AC074250.1-201ENST00000511117 192 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AP000857.1-201ENST00000532151 543 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC1A1P43005 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC1A1P43005 MTCO1P40-201ENST00000574371 625 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 MIR4429-201ENST00000580105 73 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC1A1P43005 AC015871.2-201ENST00000603605 948 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 BNIP3P11-201ENST00000603878 563 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 YPEL5P2-201ENST00000605553 359 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC1A1P43005 AC073968.1-201ENST00000618594 637 ntBASIC3.04□□□□□ -1.92
SLC1A1P43005 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC1A1P43005 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC1A1P43005 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SLC1A1P43005 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC1A1P43005 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SLC1A1P43005 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SLC1A1P43005 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC1A1P43005 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC1A1P43005 AC103988.1-201ENST00000566382 2177 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SLC1A1P43005 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SLC1A1P43005 RNU6-619P-201ENST00000365146 108 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 MIR23B-201ENST00000384832 97 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 MTND4LP20-201ENST00000402379 270 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AL354719.1-201ENST00000406535 843 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 BX664727.1-201ENST00000416024 466 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 RPL21P40-201ENST00000428586 483 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AL390023.1-201ENST00000428836 262 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC1A1P43005 SSXP4-201ENST00000451349 245 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC1A1P43005 AC078857.1-201ENST00000469870 667 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 RPL23AP11-201ENST00000475260 469 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC1A1P43005 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.03□□□□□ -1.92
SLC1A1P43005 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC1A1P43005 AC121161.1-201ENST00000510606 652 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC109471.1-201ENST00000511631 612 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
SLC1A1P43005 AP000790.1-201ENST00000528891 737 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.03□□□□□ -1.92
SLC1A1P43005 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC1A1P43005 LSM6P2-201ENST00000552208 177 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AL121603.1-201ENST00000553815 142 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC1A1P43005 SNORD39.3-201ENST00000584451 71 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AL355812.1-201ENST00000603215 216 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC026741.1-201ENST00000605892 482 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC069234.5-201ENST00000611056 416 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC084757.4-201ENST00000616350 526 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC231759.1-201ENST00000616455 597 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC090617.7-201ENST00000623952 126 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC097372.4-201ENST00000625025 466 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC1A1P43005 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC1A1P43005 MTND2P41-201ENST00000637599 773 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SLC1A1P43005 AC092447.7-201ENST00000422212 1621 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 AC130650.2-201ENST00000618736 2403 ntBASIC3.03□□□□□ -1.92
SLC1A1P43005 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SLC1A1P43005 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SLC1A1P43005 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
SLC1A1P43005 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC1A1P43005 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SLC1A1P43005 RNU6-50P-201ENST00000362356 103 ntBASIC3.02□□□□□ -1.93
SLC1A1P43005 SNORA38.1-201ENST00000364172 131 ntBASIC3.02□□□□□ -1.93
SLC1A1P43005 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms