Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AC004866.2-201ENST00000438285 481 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 USP9YP22-201ENST00000438971 294 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 OR6K5P-201ENST00000447050 945 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AC007327.1-201ENST00000447461 264 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.67□□□□□ -1.82
HNF4AP41235 AL122001.1-201ENST00000457027 370 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 ARPC3P2-201ENST00000457786 533 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.67□□□□□ -1.82
HNF4AP41235 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.67□□□□□ -1.82
HNF4AP41235 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.67□□□□□ -1.82
HNF4AP41235 ARL2BPP6-201ENST00000512757 439 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 SNORA3.4-201ENST00000515969 96 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 RNU5A-4P-201ENST00000516588 111 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.67□□□□□ -1.82
HNF4AP41235 AC022690.1-201ENST00000526681 550 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.67□□□□□ -1.82
HNF4AP41235 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.67□□□□□ -1.82
HNF4AP41235 AADACP1-206ENST00000561502 1193 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AL133457.1-201ENST00000564251 987 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.67□□□□□ -1.82
HNF4AP41235 RN7SL703P-201ENST00000578485 302 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AC022662.1-201ENST00000580252 331 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.67□□□□□ -1.82
HNF4AP41235 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.67□□□□□ -1.82
HNF4AP41235 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.67□□□□□ -1.82
HNF4AP41235 AC107075.1-201ENST00000613695 314 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HNF4AP41235 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HNF4AP41235 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HNF4AP41235 AC107982.1-201ENST00000507171 1300 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HNF4AP41235 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HNF4AP41235 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HNF4AP41235 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HNF4AP41235 NACA3P-201ENST00000359690 648 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 RNU6-1155P-201ENST00000363554 107 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 SNORD116-2-201ENST00000384274 95 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 SNORD116-6-201ENST00000384711 96 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.66□□□□□ -1.82
HNF4AP41235 HSPE1P8-201ENST00000406997 288 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 SNORA3.3-201ENST00000408712 125 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 RPS15AP38-201ENST00000413110 372 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 RPL30P2-201ENST00000414021 291 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 RPL7P30-201ENST00000420888 709 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.66□□□□□ -1.82
HNF4AP41235 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.66□□□□□ -1.82
HNF4AP41235 AC233728.2-201ENST00000425348 757 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 MTCO1P39-201ENST00000426148 480 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.66□□□□□ -1.82
HNF4AP41235 HIGD1AP11-201ENST00000438361 280 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HNF4AP41235 RPL21P133-201ENST00000443666 476 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.66□□□□□ -1.82
HNF4AP41235 AC011979.1-201ENST00000472300 483 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 HMGN2P13-201ENST00000476476 274 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 MTND2P14-201ENST00000482139 351 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.66□□□□□ -1.82
HNF4AP41235 AL139099.1-201ENST00000497398 403 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 FABP5P12-201ENST00000515543 389 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 RNA5SP208-201ENST00000516156 78 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 AC087808.1-201ENST00000520501 361 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 AP001804.3-201ENST00000525146 880 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.66□□□□□ -1.82
HNF4AP41235 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HNF4AP41235 CYCSP30-201ENST00000546447 172 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 SETP7-201ENST00000552169 453 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.66□□□□□ -1.82
HNF4AP41235 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.66□□□□□ -1.82
HNF4AP41235 MIR3912-201ENST00000577566 105 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.66□□□□□ -1.82
HNF4AP41235 AC008962.1-201ENST00000605729 304 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 TUSC7.1-201ENST00000610969 165 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 AC002076.2-201ENST00000617362 122 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 AL354798.1-201ENST00000622505 329 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
HNF4AP41235 MIR1322-201ENST00000638013 71 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HNF4AP41235 TNPO1P3-201ENST00000436471 2662 ntBASIC3.66□□□□□ -1.82
HNF4AP41235 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HNF4AP41235 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
HNF4AP41235 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.65□□□□□ -1.82
HNF4AP41235 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HNF4AP41235 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
HNF4AP41235 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HNF4AP41235 AC104454.1-201ENST00000421341 1401 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HNF4AP41235 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HNF4AP41235 SNORD116-8-201ENST00000384365 95 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 ATP5F1P4-201ENST00000397288 746 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 SNRPEP2-201ENST00000397592 279 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.65□□□□□ -1.83
HNF4AP41235 AC019178.2-201ENST00000423595 505 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 TXNL1P1-201ENST00000429528 554 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AC092427.1-201ENST00000439177 601 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms