Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNFP41002 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNFP41002 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNFP41002 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNFP41002 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNFP41002 LLPHP1-201ENST00000603571 367 ntBASIC5.16□□□□□ -1.58
CCNFP41002 AL008729.2-201ENST00000606393 473 ntBASIC5.16□□□□□ -1.58
CCNFP41002 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNFP41002 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNFP41002 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNFP41002 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNFP41002 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCNFP41002 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNFP41002 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
CCNFP41002 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCNFP41002 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCNFP41002 AC011493.1-201ENST00000596753 1632 ntBASIC5.15□□□□□ -1.58
CCNFP41002 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCNFP41002 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCNFP41002 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CCNFP41002 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.15□□□□□ -1.58
CCNFP41002 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
CCNFP41002 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCNFP41002 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCNFP41002 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CCNFP41002 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCNFP41002 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.15□□□□□ -1.58
CCNFP41002 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCNFP41002 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CCNFP41002 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.15□□□□□ -1.58
CCNFP41002 AC073343.1-201ENST00000328239 651 ntBASIC5.15□□□□□ -1.59
CCNFP41002 RNU6-1029P-201ENST00000384109 107 ntBASIC5.15□□□□□ -1.59
CCNFP41002 RNU6-831P-201ENST00000384548 107 ntBASIC5.15□□□□□ -1.59
CCNFP41002 RNU6-903P-201ENST00000391270 109 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AC013442.1-201ENST00000397347 228 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AL078599.1-201ENST00000402075 293 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AL391361.1-201ENST00000405580 489 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.15□□□□□ -1.59
CCNFP41002 CHIAP3-201ENST00000423668 1133 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AC108075.1-201ENST00000424692 529 ntBASIC5.15□□□□□ -1.59
CCNFP41002 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNFP41002 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.15□□□□□ -1.59
CCNFP41002 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.15□□□□□ -1.59
CCNFP41002 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.15□□□□□ -1.59
CCNFP41002 BRK1P2-201ENST00000442875 223 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AL589765.3-201ENST00000446084 462 ntBASIC5.15□□□□□ -1.59
CCNFP41002 TPT1P13-201ENST00000449760 499 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AL356981.1-201ENST00000454879 684 ntBASIC5.15□□□□□ -1.59
CCNFP41002 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.15□□□□□ -1.59
CCNFP41002 RNU6-1038P-201ENST00000516516 104 ntBASIC5.15□□□□□ -1.59
CCNFP41002 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNFP41002 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.15□□□□□ -1.59
CCNFP41002 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNFP41002 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.15□□□□□ -1.59
CCNFP41002 AL133153.1-201ENST00000557756 303 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AC051619.2-201ENST00000559063 397 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.15□□□□□ -1.59
CCNFP41002 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNFP41002 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNFP41002 AC069307.1-201ENST00000602820 447 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AC113139.1-201ENST00000605049 239 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AP005432.2-201ENST00000608162 586 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AC006329.2-201ENST00000611491 394 ntBASIC5.15□□□□□ -1.59
CCNFP41002 AC022467.1-201ENST00000614738 749 ntBASIC5.15□□□□□ -1.59
CCNFP41002 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.15□□□□□ -1.59
CCNFP41002 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.15□□□□□ -1.59
CCNFP41002 AL133216.2-202ENST00000634512 349 ntBASIC5.15□□□□□ -1.59
CCNFP41002 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CCNFP41002 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCNFP41002 SOCS5P3-201ENST00000425115 1576 ntBASIC5.15□□□□□ -1.59
CCNFP41002 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCNFP41002 AL592437.2-201ENST00000421655 2434 ntBASIC5.15□□□□□ -1.59
CCNFP41002 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.15□□□□□ -1.59
CCNFP41002 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCNFP41002 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCNFP41002 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCNFP41002 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.14□□□□□ -1.59
CCNFP41002 MTND5P3-201ENST00000438536 1800 ntBASIC5.14□□□□□ -1.59
CCNFP41002 AC092747.4-201ENST00000620519 1861 ntBASIC5.14□□□□□ -1.59
CCNFP41002 AC004972.1-201ENST00000623934 2209 ntBASIC5.14□□□□□ -1.59
CCNFP41002 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CCNFP41002 U3.3-201ENST00000362986 216 ntBASIC5.14□□□□□ -1.59
CCNFP41002 RN7SKP224-201ENST00000364140 325 ntBASIC5.14□□□□□ -1.59
CCNFP41002 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 Y_RNA.387-201ENST00000383918 102 ntBASIC5.14□□□□□ -1.59
CCNFP41002 RNU6-339P-201ENST00000384310 107 ntBASIC5.14□□□□□ -1.59
CCNFP41002 RNU11-4P-201ENST00000391149 133 ntBASIC5.14□□□□□ -1.59
CCNFP41002 GLULP6-201ENST00000399502 913 ntBASIC5.14□□□□□ -1.59
CCNFP41002 MIR1286-201ENST00000408112 78 ntBASIC5.14□□□□□ -1.59
CCNFP41002 RNU2-47P-201ENST00000410649 186 ntBASIC5.14□□□□□ -1.59
CCNFP41002 EIF4A1P3-201ENST00000411521 244 ntBASIC5.14□□□□□ -1.59
CCNFP41002 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.14□□□□□ -1.59
CCNFP41002 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.14□□□□□ -1.59
CCNFP41002 HSPE1P1-201ENST00000421494 318 ntBASIC5.14□□□□□ -1.59
CCNFP41002 RPS12P5-201ENST00000423449 371 ntBASIC5.14□□□□□ -1.59
CCNFP41002 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.14□□□□□ -1.59
CCNFP41002 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms