Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC025750.1-201ENST00000399891 379 ntBASIC3.91□□□□□ -1.78
HADHAP40939 Z98941.1-201ENST00000407764 100 ntBASIC3.91□□□□□ -1.78
HADHAP40939 PIGPP2-201ENST00000411569 458 ntBASIC3.91□□□□□ -1.78
HADHAP40939 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.91□□□□□ -1.78
HADHAP40939 Z97055.1-201ENST00000419730 712 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AL022400.1-201ENST00000423946 935 ntBASIC3.91□□□□□ -1.78
HADHAP40939 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.91□□□□□ -1.78
HADHAP40939 SGO1P2-201ENST00000429458 1589 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.91□□□□□ -1.78
HADHAP40939 SETP5-201ENST00000437270 562 ntBASIC3.91□□□□□ -1.78
HADHAP40939 RPS17P13-201ENST00000448974 407 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AC104978.1-201ENST00000449387 391 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AC098826.2-201ENST00000452011 651 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.91□□□□□ -1.78
HADHAP40939 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.91□□□□□ -1.78
HADHAP40939 PPIAP15-201ENST00000479662 484 ntBASIC3.91□□□□□ -1.78
HADHAP40939 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HADHAP40939 AC104685.1-201ENST00000502445 371 ntBASIC3.91□□□□□ -1.78
HADHAP40939 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.91□□□□□ -1.78
HADHAP40939 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HADHAP40939 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.91□□□□□ -1.78
HADHAP40939 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.91□□□□□ -1.78
HADHAP40939 SUMO2P20-201ENST00000520803 283 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.91□□□□□ -1.78
HADHAP40939 CR383656.7-201ENST00000548164 174 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AC090877.1-201ENST00000561418 344 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.91□□□□□ -1.78
HADHAP40939 MIR1254-2-201ENST00000579553 63 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.91□□□□□ -1.78
HADHAP40939 AC053481.4-201ENST00000583164 216 ntBASIC3.91□□□□□ -1.78
HADHAP40939 DUXAP11-201ENST00000603858 526 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AC090186.1-201ENST00000605991 572 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AC009464.1-201ENST00000615731 469 ntBASIC3.91□□□□□ -1.78
HADHAP40939 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HADHAP40939 AL360181.4-201ENST00000621752 134 ntBASIC3.91□□□□□ -1.78
HADHAP40939 MIR6500-201ENST00000622700 86 ntBASIC3.91□□□□□ -1.78
HADHAP40939 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.91□□□□□ -1.78
HADHAP40939 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.91□□□□□ -1.78
HADHAP40939 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HADHAP40939 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HADHAP40939 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HADHAP40939 ZNF542P-204ENST00000482727 1305 ntBASIC3.91□□□□□ -1.78
HADHAP40939 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.91□□□□□ -1.78
HADHAP40939 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.9□□□□□ -1.78
HADHAP40939 AL645937.1-201ENST00000641739 1652 ntBASIC3.9□□□□□ -1.78
HADHAP40939 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HADHAP40939 RNU1-18P-201ENST00000363062 164 ntBASIC3.9□□□□□ -1.79
HADHAP40939 RNU6-1155P-201ENST00000363554 107 ntBASIC3.9□□□□□ -1.79
HADHAP40939 MIR134-201ENST00000385258 73 ntBASIC3.9□□□□□ -1.79
HADHAP40939 RNU6-328P-201ENST00000390887 106 ntBASIC3.9□□□□□ -1.79
HADHAP40939 MTND4P13-201ENST00000402078 1023 ntBASIC3.9□□□□□ -1.79
HADHAP40939 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.9□□□□□ -1.79
HADHAP40939 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HADHAP40939 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.9□□□□□ -1.79
HADHAP40939 BEND7P1-201ENST00000422058 457 ntBASIC3.9□□□□□ -1.79
HADHAP40939 OR8F1P-201ENST00000425243 930 ntBASIC3.9□□□□□ -1.79
HADHAP40939 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.9□□□□□ -1.79
HADHAP40939 AC002381.1-201ENST00000447049 280 ntBASIC3.9□□□□□ -1.79
HADHAP40939 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.9□□□□□ -1.79
HADHAP40939 BX322784.1-201ENST00000455793 1077 ntBASIC3.9□□□□□ -1.79
HADHAP40939 snoU13.4-201ENST00000458916 104 ntBASIC3.9□□□□□ -1.79
HADHAP40939 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.9□□□□□ -1.79
HADHAP40939 RPL21P129-201ENST00000491732 478 ntBASIC3.9□□□□□ -1.79
HADHAP40939 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.9□□□□□ -1.79
HADHAP40939 RN7SKP209-201ENST00000516888 304 ntBASIC3.9□□□□□ -1.79
HADHAP40939 NDUFA5P2-201ENST00000519723 344 ntBASIC3.9□□□□□ -1.79
HADHAP40939 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HADHAP40939 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HADHAP40939 LRRC34P1-201ENST00000542742 915 ntBASIC3.9□□□□□ -1.79
HADHAP40939 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.9□□□□□ -1.79
HADHAP40939 AC074050.1-201ENST00000563247 211 ntBASIC3.9□□□□□ -1.79
HADHAP40939 AC087481.2-201ENST00000565492 330 ntBASIC3.9□□□□□ -1.79
HADHAP40939 AC120057.2-201ENST00000571520 271 ntBASIC3.9□□□□□ -1.79
HADHAP40939 ISCA1P3-201ENST00000577104 373 ntBASIC3.9□□□□□ -1.79
HADHAP40939 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.9□□□□□ -1.79
HADHAP40939 AC012669.1-201ENST00000603209 283 ntBASIC3.9□□□□□ -1.79
HADHAP40939 AL451086.1-201ENST00000605596 223 ntBASIC3.9□□□□□ -1.79
HADHAP40939 AL139418.1-201ENST00000613613 177 ntBASIC3.9□□□□□ -1.79
HADHAP40939 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HADHAP40939 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.9□□□□□ -1.79
HADHAP40939 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HADHAP40939 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HADHAP40939 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.9□□□□□ -1.79
HADHAP40939 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
HADHAP40939 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HADHAP40939 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.9□□□□□ -1.79
HADHAP40939 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.9□□□□□ -1.79
HADHAP40939 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HADHAP40939 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.89□□□□□ -1.79
HADHAP40939 TNPO1P3-201ENST00000436471 2662 ntBASIC3.89□□□□□ -1.79
HADHAP40939 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HADHAP40939 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.89□□□□□ -1.79
HADHAP40939 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HADHAP40939 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.89□□□□□ -1.79
HADHAP40939 AL391994.1-201ENST00000254724 282 ntBASIC3.89□□□□□ -1.79
HADHAP40939 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HADHAP40939 RNU6-1074P-201ENST00000383995 104 ntBASIC3.89□□□□□ -1.79
HADHAP40939 MIR199A2-201ENST00000385289 110 ntBASIC3.89□□□□□ -1.79
HADHAP40939 SNORA48.7-201ENST00000391302 135 ntBASIC3.89□□□□□ -1.79
HADHAP40939 RN7SKP202-201ENST00000410439 330 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms