Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.31□□□□□ -1.72
HOXD12P35452 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
HOXD12P35452 AL133457.1-201ENST00000564251 987 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 LARP7P2-201ENST00000575306 125 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 MTND1P15-201ENST00000579262 949 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 MIR4644-201ENST00000579929 84 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 RN7SL600P-201ENST00000581811 299 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD12P35452 AC083760.1-201ENST00000589621 670 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD12P35452 HMGB1P50-201ENST00000605814 607 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD12P35452 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD12P35452 AL359740.1-201ENST00000624340 592 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD12P35452 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
HOXD12P35452 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD12P35452 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD12P35452 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD12P35452 AC139769.1-204ENST00000472297 1931 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 USP8P1-201ENST00000494673 3183 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXD12P35452 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXD12P35452 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXD12P35452 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
HOXD12P35452 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXD12P35452 RNU5F-6P-201ENST00000362979 116 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 SNORD82-201ENST00000365530 70 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 RNU6-821P-201ENST00000390995 107 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 PTMAP2-201ENST00000397627 327 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AL138878.1-201ENST00000405131 347 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 RNU6ATAC-201ENST00000408749 126 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 RPL17P12-201ENST00000413391 526 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 RPS27AP14-201ENST00000422868 454 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 MTCO3P30-201ENST00000426425 670 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 AL592447.1-201ENST00000447592 540 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AL358232.1-201ENST00000448030 501 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AL162151.2-201ENST00000448875 158 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 FABP3P2-201ENST00000453169 399 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 RPS20P24-201ENST00000457473 361 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 AC091564.1-201ENST00000464563 479 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AP000797.1-201ENST00000478870 387 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 TMEM251P1-201ENST00000503717 318 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 ARL2BPP4-201ENST00000506854 471 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 IGKV2D-23-201ENST00000518179 286 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AC025881.1-201ENST00000518851 512 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 AC091489.2-201ENST00000566263 604 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 MAGOH2P-202ENST00000584384 429 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 BNIP3P23-201ENST00000599655 511 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AC008739.3-201ENST00000603262 127 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AC110741.2-201ENST00000605278 268 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AL021997.1-201ENST00000605757 193 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 AC027807.2-201ENST00000616099 408 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXD12P35452 AC018755.4-201ENST00000619715 454 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HOXD12P35452 AC048347.1-201ENST00000624621 427 ntBASIC4.3□□□□□ -1.72
HOXD12P35452 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD12P35452 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD12P35452 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD12P35452 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXD12P35452 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD12P35452 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HOXD12P35452 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD12P35452 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXD12P35452 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HOXD12P35452 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD12P35452 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXD12P35452 RNU1-14P-201ENST00000362759 152 ntBASIC4.29□□□□□ -1.72
HOXD12P35452 MIR670-201ENST00000390142 98 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms