Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ATP5F1P1-201ENST00000433775 569 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 RPS27P5-201ENST00000444247 244 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 RPL7P52-201ENST00000449200 742 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 RNU6-548P-201ENST00000517083 115 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 RNA5SP402-201ENST00000517148 110 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 AC245517.5-201ENST00000611529 162 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 AC000123.2-201ENST00000623124 461 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CLIP1P30622 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP1P30622 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP1P30622 AC091564.4-201ENST00000533934 2194 ntBASIC3.35□□□□□ -1.87
CLIP1P30622 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.35□□□□□ -1.87
CLIP1P30622 MTND4P13-201ENST00000402078 1023 ntBASIC3.35□□□□□ -1.87
CLIP1P30622 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP1P30622 AL121882.1-201ENST00000422893 417 ntBASIC3.35□□□□□ -1.87
CLIP1P30622 SDR42E1P3-201ENST00000438345 502 ntBASIC3.35□□□□□ -1.87
CLIP1P30622 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP1P30622 AC116337.1-201ENST00000509680 687 ntBASIC3.35□□□□□ -1.87
CLIP1P30622 MTCO1P9-201ENST00000505577 1534 ntBASIC3.34□□□□□ -1.87
CLIP1P30622 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLIP1P30622 SEPT7P7-201ENST00000420492 1301 ntBASIC3.34□□□□□ -1.87
CLIP1P30622 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CLIP1P30622 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLIP1P30622 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.34□□□□□ -1.88
CLIP1P30622 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLIP1P30622 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.34□□□□□ -1.88
CLIP1P30622 AC005005.2-201ENST00000420779 380 ntBASIC3.34□□□□□ -1.88
CLIP1P30622 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.34□□□□□ -1.88
CLIP1P30622 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.34□□□□□ -1.88
CLIP1P30622 AC091179.1-201ENST00000461606 579 ntBASIC3.34□□□□□ -1.88
CLIP1P30622 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.34□□□□□ -1.88
CLIP1P30622 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.34□□□□□ -1.88
CLIP1P30622 RNA5SP458-201ENST00000516188 119 ntBASIC3.34□□□□□ -1.88
CLIP1P30622 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.34□□□□□ -1.88
CLIP1P30622 MIR6845-201ENST00000613182 61 ntBASIC3.34□□□□□ -1.88
CLIP1P30622 MTND4P35-201ENST00000604257 1375 ntBASIC3.34□□□□□ -1.88
CLIP1P30622 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLIP1P30622 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLIP1P30622 AL356292.1-201ENST00000283110 373 ntBASIC3.33□□□□□ -1.88
CLIP1P30622 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.33□□□□□ -1.88
CLIP1P30622 AL445669.2-201ENST00000454425 421 ntBASIC3.33□□□□□ -1.88
CLIP1P30622 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.33□□□□□ -1.88
CLIP1P30622 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.33□□□□□ -1.88
CLIP1P30622 AC021733.2-201ENST00000518830 497 ntBASIC3.33□□□□□ -1.88
CLIP1P30622 AC019227.1-201ENST00000526902 510 ntBASIC3.33□□□□□ -1.88
CLIP1P30622 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.33□□□□□ -1.88
CLIP1P30622 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.33□□□□□ -1.88
CLIP1P30622 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.33□□□□□ -1.88
CLIP1P30622 AC244517.1-201ENST00000606030 2086 ntBASIC3.33□□□□□ -1.88
CLIP1P30622 AC093909.5-201ENST00000621839 1799 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 SYT14P1-202ENST00000600441 1448 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLIP1P30622 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 AL591719.1-201ENST00000444669 744 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 RPL34P26-201ENST00000445636 354 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 AC027673.1-201ENST00000456245 405 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP1P30622 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP1P30622 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.32□□□□□ -1.88
CLIP1P30622 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.32□□□□□ -1.88
CLIP1P30622 AP001148.1-201ENST00000624124 2359 ntBASIC3.32□□□□□ -1.88
CLIP1P30622 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.31□□□□□ -1.88
CLIP1P30622 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP1P30622 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLIP1P30622 RAD23BP2-201ENST00000416003 1207 ntBASIC3.31□□□□□ -1.88
CLIP1P30622 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP1P30622 AC073310.1-201ENST00000423226 1033 ntBASIC3.31□□□□□ -1.88
CLIP1P30622 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP1P30622 RPL21P2-201ENST00000440049 481 ntBASIC3.31□□□□□ -1.88
CLIP1P30622 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
CLIP1P30622 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP1P30622 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.31□□□□□ -1.88
CLIP1P30622 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP1P30622 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP1P30622 YWHAEP7-203ENST00000622054 312 ntBASIC3.31□□□□□ -1.88
CLIP1P30622 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.31□□□□□ -1.88
CLIP1P30622 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CLIP1P30622 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.31□□□□□ -1.88
CLIP1P30622 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
CLIP1P30622 AC000367.1-201ENST00000452711 1766 ntBASIC3.3□□□□□ -1.88
CLIP1P30622 AF274854.1-201ENST00000413236 615 ntBASIC3.3□□□□□ -1.88
CLIP1P30622 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
CLIP1P30622 AL445646.1-201ENST00000431784 216 ntBASIC3.3□□□□□ -1.88
CLIP1P30622 CR769767.1-201ENST00000436337 346 ntBASIC3.3□□□□□ -1.88
CLIP1P30622 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP1P30622 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP1P30622 RNU6-295P-201ENST00000516901 104 ntBASIC3.3□□□□□ -1.88
CLIP1P30622 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP1P30622 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP1P30622 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.3□□□□□ -1.88
CLIP1P30622 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLIP1P30622 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP1P30622 ZNF720P1-201ENST00000562403 1939 ntBASIC3.29□□□□□ -1.88
CLIP1P30622 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLIP1P30622 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLIP1P30622 RNA5SP247-201ENST00000411181 105 ntBASIC3.29□□□□□ -1.88
CLIP1P30622 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms