Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC096571.1-202ENST00000506634 735 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 AC091163.3-201ENST00000518269 1144 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 RPL12P22-201ENST00000519073 490 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 AP001207.2-201ENST00000519490 539 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN4P29074 TRAV37-201ENST00000553906 342 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.44□□□□□ -1.86
PTPN4P29074 AL445435.1-201ENST00000604232 665 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 AC024060.1-201ENST00000607052 494 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 MIR7851-201ENST00000610611 160 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 AL390240.1-201ENST00000612950 384 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 AC018755.4-201ENST00000619715 454 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 AC009318.4-201ENST00000620496 486 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 AC091953.5-201ENST00000622919 233 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 AC090772.4-201ENST00000623599 362 ntBASIC3.44□□□□□ -1.86
PTPN4P29074 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN4P29074 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN4P29074 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN4P29074 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PTPN4P29074 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 U3.11-201ENST00000364476 212 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN4P29074 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 C1DP1-201ENST00000426049 402 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN4P29074 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN4P29074 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 GTF2IP7-202ENST00000436677 309 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 SSXP4-201ENST00000451349 245 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 U3.44-201ENST00000458938 192 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC092754.2-201ENST00000463506 460 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC104164.3-201ENST00000467363 1258 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC013828.1-201ENST00000481845 158 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 RPL32P34-201ENST00000486380 400 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN4P29074 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN4P29074 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN4P29074 SNORA48.10-201ENST00000516965 160 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN4P29074 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 AC021451.1-201ENST00000523498 1129 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC103843.2-201ENST00000530523 682 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN4P29074 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN4P29074 AC008127.2-201ENST00000549925 1075 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN4P29074 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.43□□□□□ -1.86
PTPN4P29074 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN4P29074 MIR3912-201ENST00000577566 105 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC006116.10-201ENST00000591836 581 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC245884.10-201ENST00000597355 337 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC096947.1-201ENST00000603233 470 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 AC016597.2-201ENST00000613256 341 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN4P29074 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
PTPN4P29074 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN4P29074 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN4P29074 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
PTPN4P29074 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTPN4P29074 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.42□□□□□ -1.86
PTPN4P29074 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.42□□□□□ -1.86
PTPN4P29074 AL136133.1-201ENST00000413694 376 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPN4P29074 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPN4P29074 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPN4P29074 BX842559.1-201ENST00000419615 532 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 MTND2P9-201ENST00000422293 931 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPN4P29074 GTF2IP3-201ENST00000433887 494 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 MTCO1P53-201ENST00000441633 699 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPN4P29074 RPS20P24-201ENST00000457473 361 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 RN7SL594P-201ENST00000470590 287 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.42□□□□□ -1.86
PTPN4P29074 DSTNP2-201ENST00000504533 515 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPN4P29074 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.42□□□□□ -1.86
PTPN4P29074 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.42□□□□□ -1.86
PTPN4P29074 AC245166.1-201ENST00000521012 253 ntBASIC3.42□□□□□ -1.86
PTPN4P29074 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.42□□□□□ -1.86
PTPN4P29074 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.42□□□□□ -1.86
PTPN4P29074 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPN4P29074 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms