Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFRAP16234 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFRAP16234 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFRAP16234 AP002907.1-201ENST00000606361 1430 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFRAP16234 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFRAP16234 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PDGFRAP16234 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFRAP16234 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFRAP16234 HMGB1P17-201ENST00000403495 628 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 RN7SKP53-201ENST00000411337 315 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AC099677.1-201ENST00000420575 175 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFRAP16234 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFRAP16234 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFRAP16234 RPL21P66-201ENST00000426566 466 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 YME1L1P1-201ENST00000429435 297 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AL590103.1-201ENST00000434488 307 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AL606517.1-201ENST00000446914 387 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 RPL12P26-201ENST00000452430 487 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 RPL21P134-201ENST00000453468 483 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFRAP16234 HMGN2P16-201ENST00000456802 261 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AC092754.2-201ENST00000463506 460 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 RN7SL594P-201ENST00000470590 287 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFRAP16234 MTCO3P35-201ENST00000485582 781 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFRAP16234 MTCYBP17-201ENST00000503579 789 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 TMEM251P1-201ENST00000503717 318 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AC006390.1-201ENST00000508068 283 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AC109445.1-201ENST00000512356 383 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 RN7SKP13-201ENST00000515933 244 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 RNU6-415P-201ENST00000516252 97 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 RPL12P22-201ENST00000519073 490 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AC018630.1-201ENST00000541376 925 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AC026333.2-201ENST00000542164 106 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 DUXAP6-201ENST00000553858 601 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AC074050.1-201ENST00000563247 211 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 MAGOH2P-202ENST00000584384 429 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 BNIP3P33-201ENST00000598912 569 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AC011816.2-201ENST00000607089 556 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AC025588.4-201ENST00000615802 908 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 U4.6-201ENST00000621618 127 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AC092628.2-201ENST00000622492 339 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 AC004009.2-201ENST00000623016 728 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFRAP16234 AL390862.1-201ENST00000635467 1469 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PDGFRAP16234 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFRAP16234 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFRAP16234 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PDGFRAP16234 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFRAP16234 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.7□□□□□ -1.82
PDGFRAP16234 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFRAP16234 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFRAP16234 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AL079343.1-201ENST00000572358 1771 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.69□□□□□ -1.82
PDGFRAP16234 MTND4P34-201ENST00000572715 1371 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 FRG1CP-201ENST00000358464 769 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 Y_RNA.311-201ENST00000365068 96 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFRAP16234 MIR218-2-201ENST00000385006 110 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AL136116.1-201ENST00000403591 381 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AC092447.6-201ENST00000414578 210 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AC093578.1-201ENST00000415219 368 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AC068533.1-201ENST00000418542 415 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFRAP16234 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFRAP16234 MTND4LP10-201ENST00000435146 291 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFRAP16234 PDSS1P2-201ENST00000449397 678 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 RPL26P28-201ENST00000451325 435 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC034236.1-201ENST00000469891 373 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFRAP16234 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC006499.5-201ENST00000505037 514 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC116353.3-201ENST00000511215 249 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.69□□□□□ -1.82
PDGFRAP16234 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC126177.3-201ENST00000551839 688 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms