Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CD44P16070 ANKRD30BP1-201ENST00000451052 2186 ntBASIC7.3□□□□□ -1.24
CD44P16070 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CD44P16070 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
CD44P16070 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
CD44P16070 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.29□□□□□ -1.24
CD44P16070 ZNF702P-202ENST00000434269 1966 ntBASIC7.29□□□□□ -1.24
CD44P16070 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CD44P16070 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CD44P16070 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CD44P16070 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CD44P16070 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CD44P16070 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.29□□□□□ -1.24
CD44P16070 GNL2P1-201ENST00000451274 2190 ntBASIC7.29□□□□□ -1.24
CD44P16070 RNU6-768P-201ENST00000384683 107 ntBASIC7.29□□□□□ -1.24
CD44P16070 RN7SKP91-201ENST00000410852 288 ntBASIC7.29□□□□□ -1.24
CD44P16070 RBM22P7-201ENST00000421321 280 ntBASIC7.29□□□□□ -1.24
CD44P16070 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.29□□□□□ -1.24
CD44P16070 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC7.29□□□□□ -1.24
CD44P16070 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC7.29□□□□□ -1.24
CD44P16070 AL161636.2-201ENST00000445179 927 ntBASIC7.29□□□□□ -1.24
CD44P16070 HSPE1P13-201ENST00000451143 297 ntBASIC7.29□□□□□ -1.24
CD44P16070 AC010733.1-201ENST00000451515 401 ntBASIC7.29□□□□□ -1.24
CD44P16070 Y_RNA.637-201ENST00000459424 114 ntBASIC7.29□□□□□ -1.24
CD44P16070 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.29□□□□□ -1.24
CD44P16070 RNU6-1114P-201ENST00000516022 107 ntBASIC7.29□□□□□ -1.24
CD44P16070 AC015720.1-201ENST00000565251 277 ntBASIC7.29□□□□□ -1.24
CD44P16070 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.29□□□□□ -1.24
CD44P16070 AC091193.1-201ENST00000604640 448 ntBASIC7.29□□□□□ -1.24
CD44P16070 AC134878.1-201ENST00000619901 243 ntBASIC7.29□□□□□ -1.24
CD44P16070 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CD44P16070 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CD44P16070 SRP72P2-201ENST00000344851 1979 ntBASIC7.29□□□□□ -1.24
CD44P16070 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.29□□□□□ -1.24
CD44P16070 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.29□□□□□ -1.24
CD44P16070 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CD44P16070 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CD44P16070 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.29□□□□□ -1.24
CD44P16070 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CD44P16070 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.29□□□□□ -1.24
CD44P16070 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CD44P16070 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.28□□□□□ -1.24
CD44P16070 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 AC024587.1-201ENST00000505925 2157 ntBASIC7.28□□□□□ -1.24
CD44P16070 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 Y_RNA.280-201ENST00000364765 112 ntBASIC7.28□□□□□ -1.24
CD44P16070 AL035079.1-201ENST00000405210 287 ntBASIC7.28□□□□□ -1.24
CD44P16070 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 AL049745.1-201ENST00000433953 286 ntBASIC7.28□□□□□ -1.24
CD44P16070 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC7.28□□□□□ -1.24
CD44P16070 AC127537.2-201ENST00000439258 465 ntBASIC7.28□□□□□ -1.24
CD44P16070 RPS27AP3-201ENST00000453803 454 ntBASIC7.28□□□□□ -1.24
CD44P16070 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.28□□□□□ -1.24
CD44P16070 RN7SL184P-201ENST00000488308 297 ntBASIC7.28□□□□□ -1.24
CD44P16070 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.28□□□□□ -1.24
CD44P16070 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.28□□□□□ -1.24
CD44P16070 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.28□□□□□ -1.24
CD44P16070 RNU6-1061P-201ENST00000516530 99 ntBASIC7.28□□□□□ -1.24
CD44P16070 RNU4ATAC10P-201ENST00000516967 122 ntBASIC7.28□□□□□ -1.24
CD44P16070 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC7.28□□□□□ -1.24
CD44P16070 AL358913.1-201ENST00000554342 121 ntBASIC7.28□□□□□ -1.24
CD44P16070 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 AP001264.1-201ENST00000620602 703 ntBASIC7.28□□□□□ -1.24
CD44P16070 AL121985.3-201ENST00000620690 523 ntBASIC7.28□□□□□ -1.24
CD44P16070 AC116667.2-201ENST00000641075 823 ntBASIC7.28□□□□□ -1.24
CD44P16070 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.28□□□□□ -1.24
CD44P16070 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CD44P16070 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CD44P16070 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CD44P16070 AC139426.3-201ENST00000605648 2059 ntBASIC7.28□□□□□ -1.24
CD44P16070 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.27□□□□□ -1.24
CD44P16070 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.27□□□□□ -1.24
CD44P16070 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CD44P16070 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 AL513302.2-201ENST00000562313 1842 ntBASIC7.27□□□□□ -1.25
CD44P16070 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CD44P16070 AC134026.1-201ENST00000623249 2239 ntBASIC7.27□□□□□ -1.25
CD44P16070 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.27□□□□□ -1.25
CD44P16070 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CD44P16070 RNU6-142P-201ENST00000384019 107 ntBASIC7.27□□□□□ -1.25
CD44P16070 RNA5SP35-201ENST00000391257 129 ntBASIC7.27□□□□□ -1.25
CD44P16070 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 AC000089.1-201ENST00000424559 801 ntBASIC7.27□□□□□ -1.25
CD44P16070 PPIAP13-201ENST00000434706 478 ntBASIC7.27□□□□□ -1.25
CD44P16070 AL714022.1-201ENST00000439897 151 ntBASIC7.27□□□□□ -1.25
CD44P16070 AC009296.1-201ENST00000443146 155 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms