Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RSL24D1P4-201ENST00000400938 484 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 MTND1P20-201ENST00000430341 950 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 RPL35AP22-201ENST00000436855 335 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 CBX1P1-201ENST00000440184 427 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 FAM103A2P-201ENST00000444122 354 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 TPT1P14-201ENST00000448018 505 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 OR6C5P-201ENST00000452388 923 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB1P09429 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB1P09429 RN7SL303P-201ENST00000469773 251 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 AC006517.1-201ENST00000480485 328 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB1P09429 PCBP2P3-201ENST00000509726 843 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 AC008958.1-201ENST00000511047 682 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 MRPS36P3-201ENST00000519284 130 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGB1P09429 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB1P09429 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB1P09429 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGB1P09429 OR4H12P-201ENST00000556269 907 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 AC090888.2-201ENST00000559765 1144 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB1P09429 AC005951.2-201ENST00000576282 495 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 MIR544B-201ENST00000582372 78 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 MIR4999-201ENST00000585029 91 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 UBE2L4-201ENST00000587688 464 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 AC023510.2-201ENST00000622162 746 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB1P09429 AL158801.5-201ENST00000623123 465 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB1P09429 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB1P09429 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB1P09429 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB1P09429 MTND4P16-201ENST00000466108 1367 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB1P09429 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB1P09429 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB1P09429 AL138713.1-201ENST00000624026 2130 ntBASIC4.99□□□□□ -1.61
HMGB1P09429 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HMGB1P09429 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB1P09429 FAM35BP-202ENST00000497389 3337 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB1P09429 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB1P09429 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HMGB1P09429 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB1P09429 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB1P09429 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB1P09429 SDAD1P2-201ENST00000441308 2028 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HMGB1P09429 RNA5SP388-201ENST00000362584 119 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 SNORA48.8-201ENST00000391324 134 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.98□□□□□ -1.61
HMGB1P09429 AC009480.2-201ENST00000422916 432 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 NDUFB4P7-201ENST00000423198 363 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 XKRYP1-201ENST00000423438 492 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 MTCO2P17-201ENST00000424336 677 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 DNAJC19P7-201ENST00000428811 344 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 XKRYP2-201ENST00000432915 492 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 TAAR7P-201ENST00000436141 242 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 RPL23AP46-201ENST00000438548 490 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 OR6K1P-201ENST00000456766 971 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 AC011276.1-201ENST00000469688 323 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB1P09429 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB1P09429 AC111000.2-201ENST00000507775 550 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 SCARNA15.2-201ENST00000516409 127 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 RNA5SP519-201ENST00000516480 119 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 AP004247.1-201ENST00000531556 1289 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB1P09429 ELOCP32-201ENST00000548625 324 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 AC004024.1-201ENST00000549244 247 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 CR383656.6-201ENST00000550518 394 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 PSMB7P1-201ENST00000556349 514 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.98□□□□□ -1.61
HMGB1P09429 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.98□□□□□ -1.61
HMGB1P09429 AC064801.1-201ENST00000612025 407 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 AL138880.2-201ENST00000616214 239 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 AP005264.7-201ENST00000625003 745 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 OR5H6-203ENST00000642105 978 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HMGB1P09429 AC092125.1-201ENST00000562568 1995 ntBASIC4.98□□□□□ -1.61
HMGB1P09429 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P09429 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HMGB1P09429 AC015813.6-201ENST00000624409 5808 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P09429 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 RNA5SP52-201ENST00000362448 134 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 RNA5SP366-201ENST00000365454 123 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HMGB1P09429 CD24P4-201ENST00000382840 243 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 RNU6-754P-201ENST00000391166 107 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB1P09429 MIR1305-201ENST00000408300 86 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC004552.1-201ENST00000419089 348 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AL445669.1-201ENST00000426743 755 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms