Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP3P08254 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP3P08254 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.12□□□□□ -1.75
MMP3P08254 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC084757.1-201ENST00000559987 490 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC037471.2-201ENST00000564941 598 ntBASIC4.12□□□□□ -1.75
MMP3P08254 MTCYBP28-201ENST00000566728 1132 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC006362.1-201ENST00000567392 174 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC012213.3-201ENST00000577199 777 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP3P08254 OR6R2P-201ENST00000609216 300 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC008121.2-201ENST00000614647 523 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC009237.17-201ENST00000618111 748 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP3P08254 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.12□□□□□ -1.75
MMP3P08254 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.12□□□□□ -1.75
MMP3P08254 AP000553.6-201ENST00000641242 118 ntBASIC4.12□□□□□ -1.75
MMP3P08254 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
MMP3P08254 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MMP3P08254 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
MMP3P08254 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP3P08254 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.11□□□□□ -1.75
MMP3P08254 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.11□□□□□ -1.75
MMP3P08254 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
MMP3P08254 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MMP3P08254 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
MMP3P08254 RNU6-777P-201ENST00000364265 104 ntBASIC4.11□□□□□ -1.75
MMP3P08254 RNU6-723P-201ENST00000383973 107 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC016769.3-201ENST00000396562 315 ntBASIC4.11□□□□□ -1.75
MMP3P08254 EIF5P1-201ENST00000400019 1231 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AL023807.1-201ENST00000407932 359 ntBASIC4.11□□□□□ -1.75
MMP3P08254 SNORA11.2-201ENST00000408318 127 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC069218.2-201ENST00000411665 344 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP3P08254 RPL23AP39-201ENST00000415533 405 ntBASIC4.11□□□□□ -1.75
MMP3P08254 RPS7P15-201ENST00000415804 584 ntBASIC4.11□□□□□ -1.75
MMP3P08254 RPL7P30-201ENST00000420888 709 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC245054.1-201ENST00000420944 258 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.11□□□□□ -1.75
MMP3P08254 ZYG11AP1-201ENST00000430329 837 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.11□□□□□ -1.75
MMP3P08254 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP3P08254 MTCO1P19-201ENST00000443487 500 ntBASIC4.11□□□□□ -1.75
MMP3P08254 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP3P08254 AC097493.1-201ENST00000463958 372 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP3P08254 AL358832.1-201ENST00000497800 389 ntBASIC4.11□□□□□ -1.75
MMP3P08254 TMEM251P1-201ENST00000503717 318 ntBASIC4.11□□□□□ -1.75
MMP3P08254 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP3P08254 AC006499.2-201ENST00000513470 337 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.11□□□□□ -1.75
MMP3P08254 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP3P08254 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP3P08254 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP3P08254 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP3P08254 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.11□□□□□ -1.75
MMP3P08254 AC008011.1-201ENST00000545989 227 ntBASIC4.11□□□□□ -1.75
MMP3P08254 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP3P08254 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP3P08254 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP3P08254 ZNF415P1-201ENST00000582279 1166 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC008507.1-201ENST00000587506 734 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AC103710.4-201ENST00000609301 899 ntBASIC4.11□□□□□ -1.75
MMP3P08254 AL442067.2-201ENST00000614033 363 ntBASIC4.11□□□□□ -1.75
MMP3P08254 MIR7844-201ENST00000616161 122 ntBASIC4.11□□□□□ -1.75
MMP3P08254 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.11□□□□□ -1.75
MMP3P08254 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MMP3P08254 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
MMP3P08254 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
MMP3P08254 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.1□□□□□ -1.75
MMP3P08254 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 Y_RNA.194-201ENST00000363985 102 ntBASIC4.1□□□□□ -1.75
MMP3P08254 RNU6-1226P-201ENST00000384317 107 ntBASIC4.1□□□□□ -1.75
MMP3P08254 Y_RNA.553-201ENST00000384670 102 ntBASIC4.1□□□□□ -1.75
MMP3P08254 ARF4P3-201ENST00000397387 509 ntBASIC4.1□□□□□ -1.75
MMP3P08254 DHFRP6-201ENST00000401776 268 ntBASIC4.1□□□□□ -1.75
MMP3P08254 AL138880.1-201ENST00000405824 642 ntBASIC4.1□□□□□ -1.75
MMP3P08254 NUP35P2-201ENST00000416748 943 ntBASIC4.1□□□□□ -1.75
MMP3P08254 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.1□□□□□ -1.75
MMP3P08254 AC006366.1-201ENST00000422002 759 ntBASIC4.1□□□□□ -1.75
MMP3P08254 CYCSP46-201ENST00000423569 204 ntBASIC4.1□□□□□ -1.75
MMP3P08254 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.1□□□□□ -1.75
MMP3P08254 AC096632.1-201ENST00000427395 310 ntBASIC4.1□□□□□ -1.75
MMP3P08254 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.1□□□□□ -1.75
MMP3P08254 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
MMP3P08254 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.1□□□□□ -1.75
MMP3P08254 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.1□□□□□ -1.75
MMP3P08254 MTCO2P18-201ENST00000457151 658 ntBASIC4.1□□□□□ -1.75
MMP3P08254 MTND6P6-201ENST00000478031 263 ntBASIC4.1□□□□□ -1.75
MMP3P08254 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.1□□□□□ -1.75
MMP3P08254 AC004069.2-201ENST00000505438 1114 ntBASIC4.1□□□□□ -1.75
MMP3P08254 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
MMP3P08254 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms