Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DOAP06340 MIR1251-201ENST00000408552 70 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 Y_RNA.598-201ENST00000410480 95 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 RNU6-195P-201ENST00000411352 109 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 BX295541.1-201ENST00000417774 250 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 RPL7P30-201ENST00000420888 709 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC069157.1-201ENST00000421749 137 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 NPM1P34-201ENST00000428821 893 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC073464.1-201ENST00000429823 534 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC000111.3-201ENST00000433478 193 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC092427.1-201ENST00000439177 601 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 BTF3P5-201ENST00000457252 467 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC092757.1-201ENST00000467293 467 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 PPIAP15-201ENST00000479662 484 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC012170.1-201ENST00000495139 359 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 RNU6-528P-201ENST00000516926 100 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC009977.1-201ENST00000586015 570 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC009994.1-201ENST00000606889 253 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC091304.9-201ENST00000612091 226 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC025253.1-201ENST00000613623 543 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 AL139089.1-201ENST00000620372 975 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 DUXAP9-208ENST00000622815 614 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 AP002001.2-201ENST00000529025 1469 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DOAP06340 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DOAP06340 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
HLA-DOAP06340 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DOAP06340 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DOAP06340 RNA5SP399-201ENST00000364003 117 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DOAP06340 CIR1P3-201ENST00000405137 479 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC083875.1-201ENST00000419509 405 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC018644.1-201ENST00000429934 551 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 PGBD4P3-201ENST00000440731 581 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 MTATP6P30-201ENST00000443540 664 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 GEMIN8P3-201ENST00000445417 720 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 MTND5P20-201ENST00000448677 143 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AL590365.1-201ENST00000450788 243 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 RPS3AP14-201ENST00000483907 780 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 RN7SL323P-201ENST00000494712 295 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 MTND5P4-201ENST00000514978 288 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 RNU6-488P-201ENST00000515918 99 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 Y_RNA.702-201ENST00000516843 96 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 IGLV3-26-201ENST00000520756 302 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DOAP06340 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 MIR544B-201ENST00000582372 78 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 MIR4719-201ENST00000585233 84 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC112230.1-201ENST00000604342 547 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC010200.2-201ENST00000605098 235 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC243773.3-201ENST00000613270 256 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 Y_RNA.804-201ENST00000615262 101 ntBASIC4.71□□□□□ -1.66
HLA-DOAP06340 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DOAP06340 AC093849.1-201ENST00000563631 2209 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 NEAT1-202ENST00000501122 22743 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DOAP06340 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DOAP06340 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC025125.1-201ENST00000624743 1922 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DOAP06340 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DOAP06340 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms