Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 SNORA48.10-201ENST00000516965 160 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC104417.1-201ENST00000523974 751 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AP001317.1-201ENST00000531194 960 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AP003385.6-201ENST00000531603 374 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC007536.1-201ENST00000533382 349 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 LSM6P2-201ENST00000552208 177 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC093519.1-201ENST00000566109 298 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 MIR5680-201ENST00000577577 84 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 MIR3690-201ENST00000580266 75 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC006504.3-201ENST00000586818 523 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AL159169.3-201ENST00000608871 561 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC005156.1-201ENST00000613371 573 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC100793.4-201ENST00000613683 429 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 MIR7112-201ENST00000616126 65 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC080188.3-201ENST00000624842 748 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 LRRC77P-213ENST00000637727 880 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
HLA-DPB1P04440 AL672296.1-201ENST00000427780 2158 ntBASIC2.71□□□□□ -1.97
HLA-DPB1P04440 RNA5SP258-201ENST00000362750 119 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 RNVU1-3-201ENST00000364313 161 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 RNU6-707P-201ENST00000364647 95 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 U3.19-201ENST00000390893 196 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AL121972.1-201ENST00000402023 252 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AL451074.5-201ENST00000415894 435 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 RPS6P14-201ENST00000425165 719 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 RPL21P112-201ENST00000434403 463 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC006028.1-201ENST00000438379 402 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 BX510359.1-201ENST00000456973 237 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 MTCO3P2-201ENST00000457365 171 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC078785.3-201ENST00000476607 425 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AL358832.1-201ENST00000497800 389 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC008837.1-201ENST00000511513 412 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 MTCO3P15-201ENST00000526563 574 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 MIR3944-201ENST00000581277 108 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 XIAPP1-201ENST00000603162 600 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AL445435.1-201ENST00000604232 665 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AP003973.1-201ENST00000604639 691 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC012468.1-201ENST00000604888 430 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AP002802.2-201ENST00000605877 235 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC018754.1-201ENST00000607486 925 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC073968.1-201ENST00000618594 637 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC009318.4-201ENST00000620496 486 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DPB1P04440 AP001148.1-201ENST00000624124 2359 ntBASIC2.71□□□□□ -1.98
HLA-DPB1P04440 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 SNORA48.8-201ENST00000391324 134 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 MIR887-201ENST00000401258 79 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 USP9YP21-201ENST00000420603 432 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AL353678.1-201ENST00000422735 741 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC006548.1-201ENST00000427470 102 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 VDAC1P3-201ENST00000434069 851 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 YWHAZP7-201ENST00000436906 631 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 PTGES3P1-201ENST00000439531 483 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 RPL23AP16-201ENST00000441715 421 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AL662791.1-201ENST00000441992 928 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC104978.1-201ENST00000449387 391 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 NPM1P13-201ENST00000452663 865 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms