Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SETP2-201ENST00000553886 926 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC092474.3-201ENST00000603022 568 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 XIAPP1-201ENST00000603162 600 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AC103881.1-201ENST00000603476 538 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AC002487.1-201ENST00000604565 994 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AL109618.2-201ENST00000605527 211 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC034229.5-201ENST00000624258 185 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.63□□□□□ -1.99
MT-ND4P03905 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC233263.6-201ENST00000631132 1963 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AL645568.2-201ENST00000432815 1337 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.63□□□□□ -1.99
MT-ND4P03905 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.63□□□□□ -1.99
MT-ND4P03905 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.62□□□□□ -1.99
MT-ND4P03905 U8.9-201ENST00000365667 134 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
MT-ND4P03905 SNORD116-23-201ENST00000384645 92 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AL121978.1-201ENST00000402778 359 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AL356967.1-201ENST00000406305 431 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AL139098.1-201ENST00000407291 389 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 RNU6-575P-201ENST00000411326 105 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 ATG3P1-201ENST00000419507 911 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND4P03905 AL139281.1-201ENST00000422120 335 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 HSFY1P1-201ENST00000423928 1178 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 RPF2P1-201ENST00000424137 906 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AC109583.1-201ENST00000432156 268 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AC108734.1-201ENST00000439549 399 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AL034418.1-201ENST00000448675 860 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.62□□□□□ -1.99
MT-ND4P03905 NDUFA5P7-201ENST00000452914 242 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 FAM133DP-201ENST00000464802 691 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND4P03905 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND4P03905 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AC110794.1-201ENST00000505816 425 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.62□□□□□ -1.99
MT-ND4P03905 OR5G4P-201ENST00000525251 760 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND4P03905 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND4P03905 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AC093510.2-201ENST00000562820 896 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AP001029.3-201ENST00000588063 596 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND4P03905 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND4P03905 DUXAP4-201ENST00000603046 613 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND4P03905 AL020991.1-201ENST00000612314 373 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AC078880.5-201ENST00000617845 421 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AC073968.1-201ENST00000618594 637 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 AL161637.1-201ENST00000622380 412 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 LRRC77P-213ENST00000637727 880 ntBASIC2.62□□□□□ -1.99
MT-ND4P03905 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND4P03905 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND4P03905 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND4P03905 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND4P03905 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND4P03905 RPL9P7-201ENST00000330965 580 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MT-ND4P03905 RNU6-1249P-201ENST00000363237 111 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RNU6-115P-201ENST00000364310 107 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RNU6-207P-201ENST00000384137 107 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RPL21P75-201ENST00000396599 483 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 TAF9BP1-201ENST00000396646 746 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RPL21P28-201ENST00000401418 483 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AL592114.1-201ENST00000403842 483 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AL590004.2-201ENST00000404787 371 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 MIR1289-1-201ENST00000408836 144 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RNU2-72P-201ENST00000411175 163 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.61□□□□□ -1.99
MT-ND4P03905 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.61□□□□□ -1.99
MT-ND4P03905 UBE2D3P2-201ENST00000424409 445 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AL159987.2-201ENST00000432754 307 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC127537.2-201ENST00000439258 465 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 CDC27P1-201ENST00000445384 715 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RPL39P40-201ENST00000445481 146 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC004022.1-201ENST00000447766 1066 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 snoU13.4-201ENST00000458916 104 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RPL21P39-201ENST00000463605 483 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC011979.1-201ENST00000472300 483 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RPS27AP9-201ENST00000477681 438 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms