Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL133412.1-201ENST00000380194 2992 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
SPTA1P02549 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SPTA1P02549 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPTA1P02549 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SPTA1P02549 RNU2-6P-201ENST00000411404 190 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.01□□□□□ -2.09
SPTA1P02549 PPIAP17-201ENST00000438507 471 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 LTV1P1-201ENST00000510683 1237 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.01□□□□□ -2.09
SPTA1P02549 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.01□□□□□ -2.09
SPTA1P02549 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SPTA1P02549 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.01□□□□□ -2.09
SPTA1P02549 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
SPTA1P02549 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 RNU6-342P-201ENST00000384521 104 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 ERHP2-201ENST00000402323 299 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 MIR1183-201ENST00000408856 89 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 RNA5SP129-201ENST00000410276 118 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 RNA5SP270-201ENST00000411361 118 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 GAPDHP27-201ENST00000447427 1020 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.01□□□□□ -2.09
SPTA1P02549 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.01□□□□□ -2.09
SPTA1P02549 MIR6895-201ENST00000613497 78 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 AC022960.2-201ENST00000616300 666 ntBASIC2.01□□□□□ -2.09
SPTA1P02549 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SPTA1P02549 RN7SKP44-201ENST00000363602 316 ntBASIC2□□□□□ -2.09
SPTA1P02549 AC019129.1-201ENST00000403786 261 ntBASIC2□□□□□ -2.09
SPTA1P02549 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2□□□□□ -2.09
SPTA1P02549 SETP10-201ENST00000424368 814 ntBASIC2□□□□□ -2.09
SPTA1P02549 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2□□□□□ -2.09
SPTA1P02549 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2□□□□□ -2.09
SPTA1P02549 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2□□□□□ -2.09
SPTA1P02549 OR7K1P-201ENST00000546439 926 ntBASIC2□□□□□ -2.09
SPTA1P02549 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2□□□□□ -2.09
SPTA1P02549 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SPTA1P02549 AC093831.2-201ENST00000624393 3427 ntBASIC2□□□□□ -2.09
SPTA1P02549 SNORA40.18-201ENST00000391200 128 ntBASIC2□□□□□ -2.09
SPTA1P02549 RNU2-17P-201ENST00000410290 190 ntBASIC2□□□□□ -2.09
SPTA1P02549 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2□□□□□ -2.09
SPTA1P02549 AC007395.1-201ENST00000451333 677 ntBASIC2□□□□□ -2.09
SPTA1P02549 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2□□□□□ -2.09
SPTA1P02549 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2□□□□□ -2.09
SPTA1P02549 AC025881.1-201ENST00000518851 512 ntBASIC2□□□□□ -2.09
SPTA1P02549 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2□□□□□ -2.09
SPTA1P02549 AC010546.1-201ENST00000569391 485 ntBASIC2□□□□□ -2.09
SPTA1P02549 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2□□□□□ -2.09
SPTA1P02549 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2□□□□□ -2.09
SPTA1P02549 AL139286.1-201ENST00000604465 483 ntBASIC2□□□□□ -2.09
SPTA1P02549 BX248123.2-201ENST00000606318 124 ntBASIC2□□□□□ -2.09
SPTA1P02549 API5P2-201ENST00000397055 1498 ntBASIC2□□□□□ -2.09
SPTA1P02549 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SPTA1P02549 AL606490.7-201ENST00000433136 191 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 RPS15AP28-201ENST00000435088 386 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.99□□□□□ -2.09
SPTA1P02549 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.99□□□□□ -2.09
SPTA1P02549 RPL21P71-201ENST00000465598 459 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 DYNLL1P6-201ENST00000503440 264 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.99□□□□□ -2.09
SPTA1P02549 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.99□□□□□ -2.09
SPTA1P02549 MIR6515-201ENST00000619843 57 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 AC010872.1-201ENST00000624225 675 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SPTA1P02549 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
SPTA1P02549 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SPTA1P02549 AC009237.2-201ENST00000421358 284 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SPTA1P02549 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.99□□□□□ -2.09
SPTA1P02549 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.99□□□□□ -2.09
SPTA1P02549 AC090543.1-201ENST00000492168 485 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 RPL38P4-201ENST00000502376 214 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.99□□□□□ -2.09
SPTA1P02549 SCARNA16.3-201ENST00000516595 184 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 AC011611.5-201ENST00000552477 578 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 AC005730.3-201ENST00000583067 366 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 AC083760.1-201ENST00000589621 670 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 VN1R80P-201ENST00000597126 338 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SPTA1P02549 AL359740.1-201ENST00000624340 592 ntBASIC1.99□□□□□ -2.09
SPTA1P02549 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.98□□□□□ -2.09
SPTA1P02549 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SPTA1P02549 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SPTA1P02549 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SPTA1P02549 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.98□□□□□ -2.09
SPTA1P02549 AP005901.5-201ENST00000545779 1796 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SPTA1P02549 HSPD1P16-201ENST00000402302 394 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 SNRPFP4-201ENST00000456366 242 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.98□□□□□ -2.09
SPTA1P02549 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.98□□□□□ -2.09
SPTA1P02549 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.98□□□□□ -2.09
SPTA1P02549 AL450489.1-201ENST00000612071 468 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SPTA1P02549 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SPTA1P02549 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SPTA1P02549 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.98□□□□□ -2.09
SPTA1P02549 SNORA51.4-201ENST00000364993 124 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 RPS3AP9-201ENST00000417027 792 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms