Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNA5SP281-201ENST00000516504 135 ntBASIC2.34□□□□□ -2.03
TNFP01375 OR5BN1P-201ENST00000532955 829 ntBASIC2.34□□□□□ -2.03
TNFP01375 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFP01375 CENPUP2-201ENST00000555897 1186 ntBASIC2.34□□□□□ -2.03
TNFP01375 AC113368.1-201ENST00000603736 382 ntBASIC2.34□□□□□ -2.03
TNFP01375 AC103810.6-201ENST00000606708 136 ntBASIC2.34□□□□□ -2.03
TNFP01375 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TNFP01375 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TNFP01375 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
TNFP01375 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.33□□□□□ -2.04
TNFP01375 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
TNFP01375 AC233263.6-201ENST00000631132 1963 ntBASIC2.33□□□□□ -2.04
TNFP01375 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TNFP01375 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.33□□□□□ -2.04
TNFP01375 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFP01375 RNU1-73P-201ENST00000383971 164 ntBASIC2.33□□□□□ -2.04
TNFP01375 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TNFP01375 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.33□□□□□ -2.04
TNFP01375 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFP01375 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TNFP01375 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFP01375 RPL9P33-201ENST00000484311 566 ntBASIC2.33□□□□□ -2.04
TNFP01375 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFP01375 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.33□□□□□ -2.04
TNFP01375 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFP01375 AC022884.3-201ENST00000579571 248 ntBASIC2.33□□□□□ -2.04
TNFP01375 AC073387.2-201ENST00000604797 784 ntBASIC2.33□□□□□ -2.04
TNFP01375 SNORA35B-201ENST00000607417 129 ntBASIC2.33□□□□□ -2.04
TNFP01375 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFP01375 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.33□□□□□ -2.04
TNFP01375 AC087241.4-201ENST00000612441 480 ntBASIC2.33□□□□□ -2.04
TNFP01375 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TNFP01375 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TNFP01375 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFP01375 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.32□□□□□ -2.04
TNFP01375 AC073055.1-201ENST00000456901 1621 ntBASIC2.32□□□□□ -2.04
TNFP01375 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TNFP01375 VTRNA1-1-201ENST00000363120 99 ntBASIC2.32□□□□□ -2.04
TNFP01375 RNU6-618P-201ENST00000363518 112 ntBASIC2.32□□□□□ -2.04
TNFP01375 MIR142-201ENST00000384835 87 ntBASIC2.32□□□□□ -2.04
TNFP01375 RN7SKP140-201ENST00000411196 284 ntBASIC2.32□□□□□ -2.04
TNFP01375 RN7SKP192-201ENST00000411291 327 ntBASIC2.32□□□□□ -2.04
TNFP01375 AC107081.1-201ENST00000414975 361 ntBASIC2.32□□□□□ -2.04
TNFP01375 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.32□□□□□ -2.04
TNFP01375 AL356320.1-201ENST00000429616 163 ntBASIC2.32□□□□□ -2.04
TNFP01375 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFP01375 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFP01375 AL353705.4-201ENST00000449661 238 ntBASIC2.32□□□□□ -2.04
TNFP01375 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFP01375 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFP01375 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.32□□□□□ -2.04
TNFP01375 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFP01375 AC034244.2-201ENST00000514668 858 ntBASIC2.32□□□□□ -2.04
TNFP01375 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFP01375 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFP01375 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFP01375 AC025281.1-201ENST00000567026 265 ntBASIC2.32□□□□□ -2.04
TNFP01375 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFP01375 BDH2P1-201ENST00000602288 736 ntBASIC2.32□□□□□ -2.04
TNFP01375 AC084373.1-201ENST00000603311 235 ntBASIC2.32□□□□□ -2.04
TNFP01375 RPL23AP88-201ENST00000605759 454 ntBASIC2.32□□□□□ -2.04
TNFP01375 HMGN2P28-201ENST00000606102 262 ntBASIC2.32□□□□□ -2.04
TNFP01375 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFP01375 AC006020.1-201ENST00000420179 1854 ntBASIC2.32□□□□□ -2.04
TNFP01375 AC002546.1-201ENST00000588041 2504 ntBASIC2.32□□□□□ -2.04
TNFP01375 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TNFP01375 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.31□□□□□ -2.04
TNFP01375 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.31□□□□□ -2.04
TNFP01375 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.31□□□□□ -2.04
TNFP01375 AC109780.2-201ENST00000413467 845 ntBASIC2.31□□□□□ -2.04
TNFP01375 ATG3P1-201ENST00000419507 911 ntBASIC2.31□□□□□ -2.04
TNFP01375 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.31□□□□□ -2.04
TNFP01375 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.31□□□□□ -2.04
TNFP01375 MTATP6P11-201ENST00000428071 670 ntBASIC2.31□□□□□ -2.04
TNFP01375 RPL36AP6-201ENST00000435770 321 ntBASIC2.31□□□□□ -2.04
TNFP01375 RPS12P2-201ENST00000439728 269 ntBASIC2.31□□□□□ -2.04
TNFP01375 Z99127.2-201ENST00000441426 334 ntBASIC2.31□□□□□ -2.04
TNFP01375 RPL23AP20-201ENST00000447965 421 ntBASIC2.31□□□□□ -2.04
TNFP01375 AL513124.1-201ENST00000450410 614 ntBASIC2.31□□□□□ -2.04
TNFP01375 MRPL35P4-201ENST00000453682 566 ntBASIC2.31□□□□□ -2.04
TNFP01375 AC104472.2-201ENST00000469035 601 ntBASIC2.31□□□□□ -2.04
TNFP01375 AL024509.2-201ENST00000493462 493 ntBASIC2.31□□□□□ -2.04
TNFP01375 AC110792.2-201ENST00000510278 224 ntBASIC2.31□□□□□ -2.04
TNFP01375 MTCO2P32-201ENST00000514865 403 ntBASIC2.31□□□□□ -2.04
TNFP01375 RNU1-41P-201ENST00000516161 162 ntBASIC2.31□□□□□ -2.04
TNFP01375 RNU1-48P-201ENST00000516400 162 ntBASIC2.31□□□□□ -2.04
TNFP01375 HSPE1P20-201ENST00000538133 289 ntBASIC2.31□□□□□ -2.04
TNFP01375 AC074029.1-201ENST00000552531 1044 ntBASIC2.31□□□□□ -2.04
TNFP01375 AC090695.1-201ENST00000561269 1222 ntBASIC2.31□□□□□ -2.04
TNFP01375 AC061975.8-201ENST00000587058 721 ntBASIC2.31□□□□□ -2.04
TNFP01375 AC009159.1-201ENST00000618386 642 ntBASIC2.31□□□□□ -2.04
TNFP01375 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TNFP01375 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
TNFP01375 AC006378.2-201ENST00000623178 2476 ntBASIC2.3□□□□□ -2.04
TNFP01375 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TNFP01375 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TNFP01375 CYCSP45-201ENST00000402289 315 ntBASIC2.3□□□□□ -2.04
TNFP01375 MIR1261-201ENST00000408659 82 ntBASIC2.3□□□□□ -2.04
TNFP01375 RAD23BP2-201ENST00000416003 1207 ntBASIC2.3□□□□□ -2.04
TNFP01375 DPH3P2-201ENST00000422618 250 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms