Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.82□□□□□ -1.8
LDLRP01130 CCNG2P1-201ENST00000549521 1000 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.82□□□□□ -1.8
LDLRP01130 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 AGGF1P4-201ENST00000568249 801 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC010546.1-201ENST00000569391 485 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDLRP01130 AL606490.9-201ENST00000603331 271 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC025588.3-201ENST00000604182 274 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC106791.2-201ENST00000604680 391 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AL136981.2-201ENST00000617319 734 ntBASIC3.82□□□□□ -1.8
LDLRP01130 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LDLRP01130 AL445363.3-201ENST00000623080 671 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC231657.1-201ENST00000624313 397 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC244205.2-202ENST00000635781 342 ntBASIC3.82□□□□□ -1.8
LDLRP01130 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDLRP01130 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
LDLRP01130 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LDLRP01130 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDLRP01130 MTND5P29-201ENST00000458676 1807 ntBASIC3.81□□□□□ -1.8
LDLRP01130 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDLRP01130 MTND5P24-201ENST00000438892 1767 ntBASIC3.81□□□□□ -1.8
LDLRP01130 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LDLRP01130 NMD3P1-201ENST00000439704 1488 ntBASIC3.81□□□□□ -1.8
LDLRP01130 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDLRP01130 RNU6-931P-201ENST00000363850 107 ntBASIC3.81□□□□□ -1.8
LDLRP01130 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDLRP01130 SNORA51.6-201ENST00000384151 125 ntBASIC3.81□□□□□ -1.8
LDLRP01130 ARF4P3-201ENST00000397387 509 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL590704.1-201ENST00000402856 794 ntBASIC3.81□□□□□ -1.8
LDLRP01130 MIR1183-201ENST00000408856 89 ntBASIC3.81□□□□□ -1.8
LDLRP01130 RNA5SP36-201ENST00000410197 133 ntBASIC3.81□□□□□ -1.8
LDLRP01130 RN7SKP235-201ENST00000410662 305 ntBASIC3.81□□□□□ -1.8
LDLRP01130 MTCO3P41-201ENST00000414801 328 ntBASIC3.81□□□□□ -1.8
LDLRP01130 RAD23BP2-201ENST00000416003 1207 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AC098592.1-201ENST00000419352 333 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AC019178.2-201ENST00000423595 505 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL022400.1-201ENST00000423946 935 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL035410.1-201ENST00000427409 427 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDLRP01130 AC098826.1-201ENST00000433943 471 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.81□□□□□ -1.8
LDLRP01130 AC009961.3-201ENST00000449832 765 ntBASIC3.81□□□□□ -1.8
LDLRP01130 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.81□□□□□ -1.8
LDLRP01130 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.81□□□□□ -1.8
LDLRP01130 AC068305.1-201ENST00000497406 726 ntBASIC3.81□□□□□ -1.8
LDLRP01130 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.81□□□□□ -1.8
LDLRP01130 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.81□□□□□ -1.8
LDLRP01130 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.81□□□□□ -1.8
LDLRP01130 RNU6-232P-201ENST00000517144 64 ntBASIC3.81□□□□□ -1.8
LDLRP01130 RN7SKP234-201ENST00000517173 224 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.81□□□□□ -1.8
LDLRP01130 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.81□□□□□ -1.8
LDLRP01130 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.81□□□□□ -1.8
LDLRP01130 VN1R90P-201ENST00000595717 726 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AF131215.7-201ENST00000602443 707 ntBASIC3.81□□□□□ -1.8
LDLRP01130 SRGNP1-201ENST00000603392 451 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL590229.1-201ENST00000603497 542 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL451044.1-201ENST00000604867 238 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL009028.1-201ENST00000604895 802 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AC112220.3-201ENST00000605502 502 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AC243773.3-201ENST00000613270 256 ntBASIC3.81□□□□□ -1.8
LDLRP01130 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AL591424.2-201ENST00000617023 128 ntBASIC3.81□□□□□ -1.8
LDLRP01130 AC006065.5-201ENST00000623427 349 ntBASIC3.81□□□□□ -1.8
LDLRP01130 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LDLRP01130 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.81□□□□□ -1.8
LDLRP01130 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.81□□□□□ -1.8
LDLRP01130 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.81□□□□□ -1.8
LDLRP01130 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDLRP01130 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 AC011978.2-201ENST00000569835 2054 ntBASIC3.8□□□□□ -1.8
LDLRP01130 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 AC130650.2-201ENST00000618736 2403 ntBASIC3.8□□□□□ -1.8
LDLRP01130 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDLRP01130 MIR423-201ENST00000362201 94 ntBASIC3.8□□□□□ -1.8
LDLRP01130 RNA5SP124-201ENST00000362739 110 ntBASIC3.8□□□□□ -1.8
LDLRP01130 SNORA73.2-201ENST00000364946 201 ntBASIC3.8□□□□□ -1.8
LDLRP01130 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 MIR1251-201ENST00000408552 70 ntBASIC3.8□□□□□ -1.8
LDLRP01130 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 UBE2V1P10-201ENST00000414685 269 ntBASIC3.8□□□□□ -1.8
LDLRP01130 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.8□□□□□ -1.8
LDLRP01130 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms