Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.88□□□□□ -1.95
SHOX2O60902 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC092608.3-201ENST00000625017 386 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.88□□□□□ -1.95
SHOX2O60902 AL121594.5-201ENST00000631724 573 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.88□□□□□ -1.95
SHOX2O60902 SEC63P2-201ENST00000503863 1939 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHOX2O60902 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.87□□□□□ -1.95
SHOX2O60902 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SHOX2O60902 ARF4P3-201ENST00000397387 509 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHOX2O60902 RPS3AP9-201ENST00000417027 792 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.87□□□□□ -1.95
SHOX2O60902 RPS7P2-201ENST00000435134 607 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 UBE2V1P5-201ENST00000440070 405 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.87□□□□□ -1.95
SHOX2O60902 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.87□□□□□ -1.95
SHOX2O60902 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.87□□□□□ -1.95
SHOX2O60902 RPS15AP1-201ENST00000457423 391 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 RPS4XP10-201ENST00000465034 731 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 HMGN2P13-201ENST00000476476 274 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC093663.2-201ENST00000484625 313 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.87□□□□□ -1.95
SHOX2O60902 AC083923.1-201ENST00000523708 376 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.87□□□□□ -1.95
SHOX2O60902 AP003385.6-201ENST00000531603 374 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.87□□□□□ -1.95
SHOX2O60902 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.87□□□□□ -1.95
SHOX2O60902 OR7K1P-201ENST00000546439 926 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.87□□□□□ -1.95
SHOX2O60902 CR383656.14-201ENST00000551951 406 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC060766.3-201ENST00000591442 263 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC008687.2-201ENST00000597865 520 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC104237.2-201ENST00000612456 443 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AC016911.1-201ENST00000613297 452 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.87□□□□□ -1.95
SHOX2O60902 MIR8057-201ENST00000620957 69 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.87□□□□□ -1.95
SHOX2O60902 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHOX2O60902 ZNF734P-201ENST00000419494 1534 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHOX2O60902 ZNF271P-202ENST00000465539 1970 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SHOX2O60902 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHOX2O60902 AL512283.1-201ENST00000606756 1384 ntBASIC2.87□□□□□ -1.95
SHOX2O60902 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
SHOX2O60902 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHOX2O60902 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHOX2O60902 RNU6-543P-201ENST00000362576 108 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.86□□□□□ -1.95
SHOX2O60902 RNU6-629P-201ENST00000384061 103 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 SNORA48.5-201ENST00000391143 135 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 SSXP10-201ENST00000402595 565 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AL354719.1-201ENST00000406535 843 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 OFD1P18Y-201ENST00000420889 959 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.86□□□□□ -1.95
SHOX2O60902 RPF2P1-201ENST00000424137 906 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 MTND4LP14-201ENST00000429447 288 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AC129850.1-201ENST00000436203 508 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.86□□□□□ -1.95
SHOX2O60902 RPL17P49-201ENST00000443728 411 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.86□□□□□ -1.95
SHOX2O60902 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHOX2O60902 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHOX2O60902 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.86□□□□□ -1.95
SHOX2O60902 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.86□□□□□ -1.95
SHOX2O60902 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.86□□□□□ -1.95
SHOX2O60902 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.86□□□□□ -1.95
SHOX2O60902 AC011611.1-201ENST00000552179 197 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.86□□□□□ -1.95
SHOX2O60902 EIF5A2P1-201ENST00000564027 460 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.86□□□□□ -1.95
SHOX2O60902 LARP7P3-201ENST00000579888 337 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 MIR4672-201ENST00000583126 81 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AC103881.1-201ENST00000603476 538 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.86□□□□□ -1.95
SHOX2O60902 AC138932.5-201ENST00000617759 563 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AL109659.3-201ENST00000624985 950 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 AC068620.4-201ENST00000636730 1182 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.86□□□□□ -1.95
SHOX2O60902 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
SHOX2O60902 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 ENSAP3-201ENST00000312710 333 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 RNU6-1339P-201ENST00000363574 91 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 SNORD51.1-201ENST00000365405 77 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 MT-TC-201ENST00000387405 66 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SHOX2O60902 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SHOX2O60902 AL512633.1-201ENST00000399931 655 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 RNU4-65P-201ENST00000410473 140 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 RPS20P25-201ENST00000412447 352 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.85□□□□□ -1.95
SHOX2O60902 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 RPL21P40-201ENST00000428586 483 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 RPL36P19-201ENST00000430744 301 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 AL121890.1-201ENST00000435457 205 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 FABP5P3-201ENST00000437960 408 ntBASIC2.85□□□□□ -1.95
SHOX2O60902 HMGB1P18-201ENST00000438801 619 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms