Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC032011.1-201ENST00000611703 1549 ntBASIC3.14□□□□□ -1.91
HCN1O60741 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN1O60741 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN1O60741 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN1O60741 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN1O60741 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN1O60741 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
HCN1O60741 RNU6-989P-201ENST00000362756 107 ntBASIC3.13□□□□□ -1.91
HCN1O60741 U3.11-201ENST00000364476 212 ntBASIC3.13□□□□□ -1.91
HCN1O60741 MIR620-201ENST00000385232 95 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AL591034.1-201ENST00000407447 340 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AL023807.1-201ENST00000407932 359 ntBASIC3.13□□□□□ -1.91
HCN1O60741 RNU4-78P-201ENST00000410940 126 ntBASIC3.13□□□□□ -1.91
HCN1O60741 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN1O60741 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HCN1O60741 MTND4P3-201ENST00000417829 541 ntBASIC3.13□□□□□ -1.91
HCN1O60741 FNDC3CP-201ENST00000420795 1155 ntBASIC3.13□□□□□ -1.91
HCN1O60741 HSFY1P1-201ENST00000423928 1178 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN1O60741 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN1O60741 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN1O60741 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
HCN1O60741 AC241584.1-201ENST00000438469 1241 ntBASIC3.13□□□□□ -1.91
HCN1O60741 ISCA1P2-201ENST00000438679 421 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC008264.1-201ENST00000447612 367 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN1O60741 RPL26P28-201ENST00000451325 435 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC097262.1-201ENST00000452559 548 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.13□□□□□ -1.91
HCN1O60741 FCF1P6-201ENST00000456841 595 ntBASIC3.13□□□□□ -1.91
HCN1O60741 MTCO3P2-201ENST00000457365 171 ntBASIC3.13□□□□□ -1.91
HCN1O60741 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
HCN1O60741 HSPD1P15-201ENST00000505573 1122 ntBASIC3.13□□□□□ -1.91
HCN1O60741 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN1O60741 FCF1P8-201ENST00000510322 597 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN1O60741 SNORA48.10-201ENST00000516965 160 ntBASIC3.13□□□□□ -1.91
HCN1O60741 SNORA31.20-201ENST00000517111 133 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN1O60741 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN1O60741 ARL2BPP5-201ENST00000523141 481 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN1O60741 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN1O60741 AC005951.1-201ENST00000576706 485 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC103881.1-201ENST00000603476 538 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC073387.2-201ENST00000604797 784 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.13□□□□□ -1.91
HCN1O60741 MFSD8-245ENST00000641743 948 ntBASIC3.13□□□□□ -1.91
HCN1O60741 DBF4P1-201ENST00000412976 1892 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AL645568.2-201ENST00000432815 1337 ntBASIC3.13□□□□□ -1.91
HCN1O60741 AL079305.1-201ENST00000623159 3008 ntBASIC3.12□□□□□ -1.91
HCN1O60741 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HCN1O60741 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HCN1O60741 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
HCN1O60741 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.12□□□□□ -1.91
HCN1O60741 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
HCN1O60741 RNU6-657P-201ENST00000383904 107 ntBASIC3.12□□□□□ -1.91
HCN1O60741 RNU6-730P-201ENST00000383954 104 ntBASIC3.12□□□□□ -1.91
HCN1O60741 MIR483-201ENST00000385070 76 ntBASIC3.12□□□□□ -1.91
HCN1O60741 Y_RNA.578-201ENST00000390903 88 ntBASIC3.12□□□□□ -1.91
HCN1O60741 TAF9BP1-201ENST00000396646 746 ntBASIC3.12□□□□□ -1.91
HCN1O60741 RSL24D1P1-201ENST00000404972 493 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AC109780.2-201ENST00000413467 845 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.12□□□□□ -1.91
HCN1O60741 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.12□□□□□ -1.91
HCN1O60741 RPF2P1-201ENST00000424137 906 ntBASIC3.12□□□□□ -1.91
HCN1O60741 RPS6P14-201ENST00000425165 719 ntBASIC3.12□□□□□ -1.91
HCN1O60741 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HCN1O60741 HSFY7P-201ENST00000432672 318 ntBASIC3.12□□□□□ -1.91
HCN1O60741 HSFY8P-201ENST00000437934 318 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AC093155.1-201ENST00000440164 826 ntBASIC3.12□□□□□ -1.91
HCN1O60741 RPL23AP16-201ENST00000441715 421 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.12□□□□□ -1.91
HCN1O60741 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN1O60741 HSFY5P-201ENST00000453726 309 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN1O60741 TRBV26-201ENST00000456572 344 ntBASIC3.12□□□□□ -1.91
HCN1O60741 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN1O60741 AC008155.2-201ENST00000464337 397 ntBASIC3.12□□□□□ -1.91
HCN1O60741 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
HCN1O60741 PABPC1P3-201ENST00000469174 459 ntBASIC3.12□□□□□ -1.91
HCN1O60741 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.12□□□□□ -1.91
HCN1O60741 AC093663.1-201ENST00000497190 394 ntBASIC3.12□□□□□ -1.91
HCN1O60741 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HCN1O60741 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN1O60741 SNORA70.24-201ENST00000517233 118 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
HCN1O60741 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.12□□□□□ -1.91
HCN1O60741 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.12□□□□□ -1.91
HCN1O60741 ZNF705CP-201ENST00000530515 889 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AP003385.6-201ENST00000531603 374 ntBASIC3.12□□□□□ -1.91
HCN1O60741 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.12□□□□□ -1.91
HCN1O60741 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.12□□□□□ -1.91
HCN1O60741 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.12□□□□□ -1.91
HCN1O60741 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HCN1O60741 AP001029.3-201ENST00000588063 596 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AL669831.4-202ENST00000590817 238 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.12□□□□□ -1.91
HCN1O60741 AL133393.1-201ENST00000603277 287 ntBASIC3.12□□□□□ -1.91
HCN1O60741 AC024060.1-201ENST00000607052 494 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms