Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC012669.1-201ENST00000603209 283 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC004853.1-201ENST00000604902 698 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC128687.1-201ENST00000605304 619 ntBASIC3.61□□□□□ -1.83
SSX4O60224 FAM27D1-201ENST00000612308 341 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AL445363.3-201ENST00000623080 671 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AF246928.1-201ENST00000623768 87 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC138649.5-201ENST00000637456 137 ntBASIC3.61□□□□□ -1.83
SSX4O60224 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSX4O60224 RLIMP1-201ENST00000339626 1680 ntBASIC3.61□□□□□ -1.83
SSX4O60224 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSX4O60224 MAPK10-373ENST00000641983 6772 ntBASIC3.61□□□□□ -1.83
SSX4O60224 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.6□□□□□ -1.83
SSX4O60224 CR381670.1-201ENST00000624291 1693 ntBASIC3.6□□□□□ -1.83
SSX4O60224 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.6□□□□□ -1.83
SSX4O60224 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
SSX4O60224 RNU2-47P-201ENST00000410649 186 ntBASIC3.6□□□□□ -1.83
SSX4O60224 TOMM22P1-201ENST00000418578 312 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX4O60224 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.6□□□□□ -1.83
SSX4O60224 MTND4LP10-201ENST00000435146 291 ntBASIC3.6□□□□□ -1.83
SSX4O60224 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.6□□□□□ -1.83
SSX4O60224 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SSX4O60224 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 RPL21P89-201ENST00000444021 467 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX4O60224 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.6□□□□□ -1.83
SSX4O60224 RPL30P9-201ENST00000465586 330 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX4O60224 AC118465.1-201ENST00000513820 1271 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC034159.1-201ENST00000513885 583 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC099522.1-202ENST00000514718 367 ntBASIC3.6□□□□□ -1.83
SSX4O60224 MTCO1P47-201ENST00000523889 1271 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 AC006064.5-201ENST00000541782 248 ntBASIC3.6□□□□□ -1.83
SSX4O60224 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.6□□□□□ -1.83
SSX4O60224 SETP7-201ENST00000552169 453 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX4O60224 AC006270.2-201ENST00000578523 652 ntBASIC3.6□□□□□ -1.83
SSX4O60224 MIR4429-201ENST00000580105 73 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX4O60224 AL353997.4-201ENST00000586196 166 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC006130.2-201ENST00000586202 326 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX4O60224 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.6□□□□□ -1.83
SSX4O60224 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.6□□□□□ -1.83
SSX4O60224 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 AC245389.1-201ENST00000605141 529 ntBASIC3.6□□□□□ -1.83
SSX4O60224 AC097468.3-201ENST00000607956 456 ntBASIC3.6□□□□□ -1.83
SSX4O60224 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.6□□□□□ -1.83
SSX4O60224 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 MIR7702-201ENST00000621931 59 ntBASIC3.6□□□□□ -1.83
SSX4O60224 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 CU459211.1-201ENST00000635667 749 ntBASIC3.6□□□□□ -1.83
SSX4O60224 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SSX4O60224 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX4O60224 MTND4P16-201ENST00000466108 1367 ntBASIC3.6□□□□□ -1.83
SSX4O60224 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 AL157700.1-201ENST00000561973 1432 ntBASIC3.6□□□□□ -1.83
SSX4O60224 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SSX4O60224 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSX4O60224 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SSX4O60224 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSX4O60224 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SSX4O60224 AL161781.1-201ENST00000354277 403 ntBASIC3.59□□□□□ -1.83
SSX4O60224 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SSX4O60224 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SSX4O60224 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX4O60224 RN7SKP33-201ENST00000410942 340 ntBASIC3.59□□□□□ -1.83
SSX4O60224 HMGB1P11-201ENST00000413899 637 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX4O60224 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX4O60224 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX4O60224 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX4O60224 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX4O60224 RPL23AP46-201ENST00000438548 490 ntBASIC3.59□□□□□ -1.83
SSX4O60224 NPM1P49-201ENST00000448027 714 ntBASIC3.59□□□□□ -1.83
SSX4O60224 RPL23AP81-201ENST00000455252 467 ntBASIC3.59□□□□□ -1.83
SSX4O60224 ST13P14-201ENST00000474095 734 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC104563.1-201ENST00000476147 376 ntBASIC3.59□□□□□ -1.83
SSX4O60224 RPS3AP43-201ENST00000479743 781 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AF213884.1-201ENST00000488102 463 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC078918.1-201ENST00000498515 228 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX4O60224 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX4O60224 TXNP6-201ENST00000510190 310 ntBASIC3.59□□□□□ -1.83
SSX4O60224 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX4O60224 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms