Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SNORA1.3-201ENST00000384676 136 ntBASIC2.68□□□□□ -1.98
SGCEO43556 SNORD67-201ENST00000390833 111 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.68□□□□□ -1.98
SGCEO43556 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.68□□□□□ -1.98
SGCEO43556 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.68□□□□□ -1.98
SGCEO43556 AC007000.2-201ENST00000442564 487 ntBASIC2.68□□□□□ -1.98
SGCEO43556 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.68□□□□□ -1.98
SGCEO43556 AL590664.1-201ENST00000448065 339 ntBASIC2.68□□□□□ -1.98
SGCEO43556 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.68□□□□□ -1.98
SGCEO43556 GSTA11P-201ENST00000452866 669 ntBASIC2.68□□□□□ -1.98
SGCEO43556 MTND2P6-201ENST00000455337 1030 ntBASIC2.68□□□□□ -1.98
SGCEO43556 RPS4XP6-201ENST00000477670 797 ntBASIC2.68□□□□□ -1.98
SGCEO43556 RPL30P14-201ENST00000482744 348 ntBASIC2.68□□□□□ -1.98
SGCEO43556 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SGCEO43556 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.68□□□□□ -1.98
SGCEO43556 AC126177.3-201ENST00000551839 688 ntBASIC2.68□□□□□ -1.98
SGCEO43556 LSM6P2-201ENST00000552208 177 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.68□□□□□ -1.98
SGCEO43556 AP005205.1-201ENST00000563503 508 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AC095057.3-201ENST00000567102 1157 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AC053481.3-201ENST00000577881 843 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.68□□□□□ -1.98
SGCEO43556 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.68□□□□□ -1.98
SGCEO43556 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.68□□□□□ -1.98
SGCEO43556 CCDC58P3-201ENST00000590792 430 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.68□□□□□ -1.98
SGCEO43556 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
SGCEO43556 SRGNP1-201ENST00000603392 451 ntBASIC2.68□□□□□ -1.98
SGCEO43556 BNIP3P4-201ENST00000604946 565 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AC006329.2-201ENST00000611491 394 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AC105227.2-201ENST00000615075 605 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AL162233.1-201ENST00000620014 944 ntBASIC2.68□□□□□ -1.98
SGCEO43556 AC104820.1-201ENST00000624183 307 ntBASIC2.68□□□□□ -1.98
SGCEO43556 FRG1DP-201ENST00000635586 771 ntBASIC2.68□□□□□ -1.98
SGCEO43556 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.68□□□□□ -1.98
SGCEO43556 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
SGCEO43556 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SGCEO43556 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SGCEO43556 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
SGCEO43556 AC233263.6-201ENST00000631132 1963 ntBASIC2.67□□□□□ -1.98
SGCEO43556 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.67□□□□□ -1.98
SGCEO43556 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SGCEO43556 AC083799.1-201ENST00000366451 910 ntBASIC2.67□□□□□ -1.98
SGCEO43556 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SGCEO43556 RNU6-921P-201ENST00000384361 107 ntBASIC2.67□□□□□ -1.98
SGCEO43556 RPS4XP3-201ENST00000398541 413 ntBASIC2.67□□□□□ -1.98
SGCEO43556 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.67□□□□□ -1.98
SGCEO43556 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 RPL23AP58-201ENST00000440453 469 ntBASIC2.67□□□□□ -1.98
SGCEO43556 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 RN7SL20P-201ENST00000488827 297 ntBASIC2.67□□□□□ -1.98
SGCEO43556 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SGCEO43556 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 RNU6-826P-201ENST00000516827 104 ntBASIC2.67□□□□□ -1.98
SGCEO43556 RN7SKP272-201ENST00000516988 232 ntBASIC2.67□□□□□ -1.98
SGCEO43556 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 AC090666.1-201ENST00000578241 445 ntBASIC2.67□□□□□ -1.98
SGCEO43556 MIR5004-201ENST00000579078 107 ntBASIC2.67□□□□□ -1.98
SGCEO43556 MIR3944-201ENST00000581277 108 ntBASIC2.67□□□□□ -1.98
SGCEO43556 AC245036.5-201ENST00000596330 847 ntBASIC2.67□□□□□ -1.98
SGCEO43556 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.67□□□□□ -1.98
SGCEO43556 AL159169.3-201ENST00000608871 561 ntBASIC2.67□□□□□ -1.98
SGCEO43556 AC096586.1-201ENST00000610267 561 ntBASIC2.67□□□□□ -1.98
SGCEO43556 AC106028.5-201ENST00000610332 395 ntBASIC2.67□□□□□ -1.98
SGCEO43556 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.67□□□□□ -1.98
SGCEO43556 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.67□□□□□ -1.98
SGCEO43556 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.67□□□□□ -1.98
SGCEO43556 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SGCEO43556 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SGCEO43556 AP003122.5-201ENST00000527668 3766 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AC091564.4-201ENST00000533934 2194 ntBASIC2.66□□□□□ -1.98
SGCEO43556 FAM35BP-202ENST00000497389 3337 ntBASIC2.66□□□□□ -1.98
SGCEO43556 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SGCEO43556 MIR22-201ENST00000362190 85 ntBASIC2.66□□□□□ -1.98
SGCEO43556 VTRNA1-1-201ENST00000363120 99 ntBASIC2.66□□□□□ -1.98
SGCEO43556 RNU1-109P-201ENST00000383960 147 ntBASIC2.66□□□□□ -1.98
SGCEO43556 RNU6-77P-201ENST00000410554 91 ntBASIC2.66□□□□□ -1.98
SGCEO43556 RAP1BP1-201ENST00000412709 553 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SGCEO43556 AC092170.1-201ENST00000440211 356 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.66□□□□□ -1.98
SGCEO43556 AL645638.1-201ENST00000440519 361 ntBASIC2.66□□□□□ -1.98
SGCEO43556 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.66□□□□□ -1.98
SGCEO43556 MTND2P19-201ENST00000449129 1012 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.66□□□□□ -1.98
SGCEO43556 RPS20P24-201ENST00000457473 361 ntBASIC2.66□□□□□ -1.98
SGCEO43556 RN7SL504P-201ENST00000494496 287 ntBASIC2.66□□□□□ -1.98
SGCEO43556 GMPSP1-201ENST00000514075 579 ntBASIC2.66□□□□□ -1.98
SGCEO43556 OR10V3P-201ENST00000525712 725 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.66□□□□□ -1.98
SGCEO43556 CKS1BP1-201ENST00000555221 240 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AADACP1-206ENST00000561502 1193 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.66□□□□□ -1.98
SGCEO43556 AL031985.2-201ENST00000600955 480 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AC091057.2-201ENST00000602594 792 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms