Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 USP9YP27-201ENST00000418455 438 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 RPL7P37-201ENST00000425095 738 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.19□□□□□ -2.06
HMGB3O15347 AC092427.1-202ENST00000430569 476 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 AC091153.1-201ENST00000466297 402 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGB3O15347 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HMGB3O15347 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 RNU1-45P-201ENST00000517191 141 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 AC026403.1-201ENST00000518938 295 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 MTCO1P47-201ENST00000523889 1271 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 OR4R1P-201ENST00000529879 463 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 AP002404.1-201ENST00000532005 451 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 AP005205.1-201ENST00000563503 508 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HMGB3O15347 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB3O15347 AC069200.1-201ENST00000609511 323 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 AC024941.1-201ENST00000612250 334 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 AC018926.3-201ENST00000618841 406 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.19□□□□□ -2.06
HMGB3O15347 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 AC244517.1-201ENST00000606030 2086 ntBASIC2.19□□□□□ -2.06
HMGB3O15347 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
HMGB3O15347 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB3O15347 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB3O15347 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HMGB3O15347 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HMGB3O15347 RNA5SP515-201ENST00000364570 118 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 SNORA54-201ENST00000384281 123 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 FNDC3CP-201ENST00000420795 1155 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 RPL7P30-201ENST00000420888 709 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGB3O15347 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGB3O15347 AC007389.2-201ENST00000434630 306 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 RPL23AP31-201ENST00000456160 467 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 AC027673.1-201ENST00000456245 405 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 AL359385.1-201ENST00000456509 365 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 RPS4XP10-201ENST00000465034 731 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGB3O15347 RPL37P25-201ENST00000507308 276 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB3O15347 AC091826.1-201ENST00000514065 313 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGB3O15347 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGB3O15347 AC018630.1-201ENST00000541376 925 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HMGB3O15347 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.18□□□□□ -2.06
HMGB3O15347 AL049779.4-201ENST00000604500 156 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 AC106900.2-201ENST00000604994 317 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGB3O15347 AC013468.1-201ENST00000608680 598 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 CR381653.2-201ENST00000624041 768 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGB3O15347 AC110079.1-202ENST00000635213 138 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HMGB3O15347 AL049781.1-201ENST00000623195 3585 ntBASIC2.18□□□□□ -2.06
HMGB3O15347 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB3O15347 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGB3O15347 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMGB3O15347 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HMGB3O15347 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HMGB3O15347 RNA5SP210-201ENST00000391034 120 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 RN7SKP202-201ENST00000410439 330 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMGB3O15347 AC079780.1-201ENST00000428259 207 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB3O15347 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB3O15347 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB3O15347 AL606490.8-201ENST00000441624 319 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGB3O15347 VN1R34P-201ENST00000447387 883 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGB3O15347 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGB3O15347 RPS4XP6-201ENST00000477670 797 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 KC877373.1-201ENST00000479066 408 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGB3O15347 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB3O15347 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB3O15347 PRELID3BP4-201ENST00000515476 571 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 AC009812.2-201ENST00000517657 457 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 AC025881.1-201ENST00000518851 512 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGB3O15347 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGB3O15347 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGB3O15347 H3F3AP1-201ENST00000559984 334 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.17□□□□□ -2.06
HMGB3O15347 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB3O15347 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGB3O15347 AL606834.2-201ENST00000602954 668 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 BX649567.1-201ENST00000642071 1134 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms