Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RPL7P5-201ENST00000471472 736 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 RPL23AP45-201ENST00000476406 468 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 AC114801.2-201ENST00000503825 781 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.27□□□□□ -2.05
CACNA1AO00555 RPL23AP84-201ENST00000571193 464 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.27□□□□□ -2.05
CACNA1AO00555 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CACNA1AO00555 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CACNA1AO00555 SKINT1L-201ENST00000401057 817 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 RPS29P6-201ENST00000438196 145 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.26□□□□□ -2.05
CACNA1AO00555 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.26□□□□□ -2.05
CACNA1AO00555 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.26□□□□□ -2.05
CACNA1AO00555 KCTD9P5-201ENST00000504141 1170 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
CACNA1AO00555 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.26□□□□□ -2.05
CACNA1AO00555 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CACNA1AO00555 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CACNA1AO00555 RNU4-74P-201ENST00000411280 161 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 AC004965.1-201ENST00000413033 213 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 RPS7P5-201ENST00000441482 581 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.26□□□□□ -2.05
CACNA1AO00555 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.26□□□□□ -2.05
CACNA1AO00555 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.26□□□□□ -2.05
CACNA1AO00555 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 AC011270.1-201ENST00000558606 583 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.26□□□□□ -2.05
CACNA1AO00555 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.26□□□□□ -2.05
CACNA1AO00555 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.26□□□□□ -2.05
CACNA1AO00555 MIR151B-201ENST00000584249 96 ntBASIC2.26□□□□□ -2.05
CACNA1AO00555 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CACNA1AO00555 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CACNA1AO00555 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CACNA1AO00555 IPMKP1-201ENST00000425988 855 ntBASIC2.25□□□□□ -2.05
CACNA1AO00555 HMGN1P7-201ENST00000491722 313 ntBASIC2.25□□□□□ -2.05
CACNA1AO00555 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.25□□□□□ -2.05
CACNA1AO00555 HMGB1P1-201ENST00000522557 636 ntBASIC2.25□□□□□ -2.05
CACNA1AO00555 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.25□□□□□ -2.05
CACNA1AO00555 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.25□□□□□ -2.05
CACNA1AO00555 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CACNA1AO00555 AC092881.1-201ENST00000638218 2733 ntBASIC2.25□□□□□ -2.05
CACNA1AO00555 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.25□□□□□ -2.05
CACNA1AO00555 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CACNA1AO00555 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.25□□□□□ -2.05
CACNA1AO00555 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.25□□□□□ -2.05
CACNA1AO00555 RPL12P18-201ENST00000437175 325 ntBASIC2.25□□□□□ -2.05
CACNA1AO00555 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.25□□□□□ -2.05
CACNA1AO00555 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.25□□□□□ -2.05
CACNA1AO00555 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.25□□□□□ -2.05
CACNA1AO00555 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CACNA1AO00555 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CACNA1AO00555 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CACNA1AO00555 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.24□□□□□ -2.05
CACNA1AO00555 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CACNA1AO00555 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CACNA1AO00555 MIR30E-201ENST00000362104 92 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 RNU6-198P-201ENST00000384258 104 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 RNU6-1105P-201ENST00000384774 107 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.24□□□□□ -2.05
CACNA1AO00555 RNA5SP104-201ENST00000410989 118 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.24□□□□□ -2.05
CACNA1AO00555 ACTR6P1-201ENST00000514311 1104 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.24□□□□□ -2.05
CACNA1AO00555 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.24□□□□□ -2.05
CACNA1AO00555 CR589904.2-201ENST00000612533 440 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CACNA1AO00555 AC016717.2-201ENST00000609089 5141 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CACNA1AO00555 AL391987.6-201ENST00000305671 199 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 HSPE1P16-201ENST00000426640 348 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 AL691517.1-201ENST00000440833 1235 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 AC104389.3-201ENST00000445629 235 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.24□□□□□ -2.05
CACNA1AO00555 RNU7-95P-201ENST00000459222 64 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.24□□□□□ -2.05
CACNA1AO00555 HNRNPKP5-201ENST00000515300 253 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.24□□□□□ -2.05
CACNA1AO00555 AL355493.4-201ENST00000618530 292 ntBASIC2.24□□□□□ -2.05
CACNA1AO00555 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CACNA1AO00555 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CACNA1AO00555 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CACNA1AO00555 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.23□□□□□ -2.05
CACNA1AO00555 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CACNA1AO00555 RN7SKP140-201ENST00000411196 284 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.23□□□□□ -2.05
CACNA1AO00555 AC006960.1-201ENST00000419980 153 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 AC010378.1-201ENST00000619270 362 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 MIR219B-201ENST00000637023 88 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 AC005261.6-201ENST00000623072 1387 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.23□□□□□ -2.05
CACNA1AO00555 Y_RNA.136-201ENST00000363444 102 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.23□□□□□ -2.05
CACNA1AO00555 AL035405.1-201ENST00000400795 710 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 AL023284.1-201ENST00000403956 276 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 AMD1P2-201ENST00000412936 992 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 RAD23BP2-201ENST00000416003 1207 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 MTND2P11-201ENST00000423638 648 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 AL592437.1-201ENST00000443781 492 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms