Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP3B1O00203 RNU6-251P-201ENST00000363235 104 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 U3.6-201ENST00000363622 211 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 U3.19-201ENST00000390893 196 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 RNA5SP252-201ENST00000391131 119 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AL356967.1-201ENST00000406305 431 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 MIR1289-1-201ENST00000408836 144 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC245052.5-201ENST00000416320 649 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.22□□□□□ -1.89
AP3B1O00203 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.22□□□□□ -1.89
AP3B1O00203 RPF2P1-201ENST00000424137 906 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.22□□□□□ -1.89
AP3B1O00203 SAR1AP4-201ENST00000429225 591 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 RPL31P54-201ENST00000429803 370 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.22□□□□□ -1.89
AP3B1O00203 RPL21P10-201ENST00000463521 490 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC093278.1-201ENST00000494700 600 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC021678.1-201ENST00000505195 936 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC112518.2-201ENST00000508565 425 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.22□□□□□ -1.89
AP3B1O00203 RN7SKP157-201ENST00000516174 282 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.22□□□□□ -1.89
AP3B1O00203 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.22□□□□□ -1.89
AP3B1O00203 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.22□□□□□ -1.89
AP3B1O00203 MTCO1P40-201ENST00000574371 625 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.22□□□□□ -1.89
AP3B1O00203 MIR2682-201ENST00000580305 110 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.22□□□□□ -1.89
AP3B1O00203 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.22□□□□□ -1.89
AP3B1O00203 MIR3922-201ENST00000585192 84 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.22□□□□□ -1.89
AP3B1O00203 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.22□□□□□ -1.89
AP3B1O00203 AC012443.1-201ENST00000605605 231 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.22□□□□□ -1.89
AP3B1O00203 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP3B1O00203 AC009464.1-201ENST00000615731 469 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 AC003001.2-201ENST00000616294 831 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP3B1O00203 MTND5P24-201ENST00000438892 1767 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP3B1O00203 AC099654.7-201ENST00000635788 2127 ntBASIC3.22□□□□□ -1.89
AP3B1O00203 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.22□□□□□ -1.89
AP3B1O00203 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AP3B1O00203 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3B1O00203 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
AP3B1O00203 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
AP3B1O00203 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 Y_RNA.126-201ENST00000363382 111 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 OR1L1-202ENST00000373686 1083 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 RNU4-47P-201ENST00000410876 114 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AL137014.1-201ENST00000420490 1226 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3B1O00203 AC241584.1-201ENST00000438469 1241 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AL121871.1-201ENST00000443413 436 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.21□□□□□ -1.9
AP3B1O00203 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3B1O00203 RN7SL293P-201ENST00000481765 281 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
AP3B1O00203 AC010625.1-201ENST00000511296 403 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3B1O00203 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.21□□□□□ -1.9
AP3B1O00203 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3B1O00203 AC007458.1-201ENST00000542812 373 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AC008127.2-201ENST00000549925 1075 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
AP3B1O00203 AL157394.1-201ENST00000562983 1224 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AC055876.1-202ENST00000567053 138 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AC002487.1-201ENST00000604565 994 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 CYP3A51P-201ENST00000633513 256 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.21□□□□□ -1.9
AP3B1O00203 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.21□□□□□ -1.9
AP3B1O00203 MIR622-201ENST00000638396 96 ntBASIC3.21□□□□□ -1.9
AP3B1O00203 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
AP3B1O00203 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
AP3B1O00203 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP3B1O00203 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
AP3B1O00203 U8.9-201ENST00000365667 134 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP3B1O00203 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.2□□□□□ -1.9
AP3B1O00203 SNORD116-23-201ENST00000384645 92 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 SNORA46-201ENST00000384762 135 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 MIR449B-201ENST00000384995 97 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
AP3B1O00203 AL355615.1-201ENST00000406187 641 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 RNA5SP274-201ENST00000410484 108 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 BX323014.1-201ENST00000412876 237 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.2□□□□□ -1.9
AP3B1O00203 SETP8-201ENST00000435341 628 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 YWHAZP7-201ENST00000436906 631 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 RPS12P18-201ENST00000442381 270 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 AC044797.1-201ENST00000445744 679 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 AL359385.1-201ENST00000456509 365 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 BTF3P5-201ENST00000457252 467 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 RN7SL601P-201ENST00000471221 293 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 SETP11-201ENST00000473027 690 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP3B1O00203 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.2□□□□□ -1.9
AP3B1O00203 OR5H3P-201ENST00000502817 919 ntBASIC3.2□□□□□ -1.9
AP3B1O00203 AC084024.2-201ENST00000503480 791 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms