Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL445189.1-201ENST00000405722 338 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 RNU6-1148P-201ENST00000410992 104 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 USP9YP20-201ENST00000419224 558 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AC018644.1-201ENST00000429934 551 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 MTND4P19-201ENST00000446659 478 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AL354714.3-201ENST00000447284 493 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AL162395.1-201ENST00000457882 422 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 RN7SL188P-201ENST00000469842 285 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AC108078.2-201ENST00000510750 236 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AC012339.2-201ENST00000523996 453 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AC093012.1-202ENST00000549403 582 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 SCOCP1-201ENST00000554676 349 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 MIR4424-201ENST00000585257 86 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AF038458.1-201ENST00000588406 262 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 AC009779.8-201ENST00000641684 4384 ntBASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TMEM88BA6NKF7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 Y_RNA.184-201ENST00000363884 108 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 RNU6-188P-201ENST00000364207 107 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 RNU6-61P-201ENST00000365528 109 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 Y_RNA.414-201ENST00000384011 101 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AL354751.2-201ENST00000415471 210 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 MTCO2P27-201ENST00000420740 428 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 NDUFA5P4-201ENST00000436704 385 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AL031584.1-201ENST00000447169 754 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AL118520.1-201ENST00000450770 291 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 RPL12P39-201ENST00000455456 496 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 NIP7P2-201ENST00000485801 544 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC091167.1-201ENST00000492017 396 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 TTC39CP1-201ENST00000512513 755 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 RNU6-1095P-201ENST00000516148 108 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 NARSP2-201ENST00000518524 679 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 MTCO3P13-201ENST00000577757 781 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 LLPHP1-201ENST00000603571 367 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AL133255.1-201ENST00000606374 441 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC110801.1-201ENST00000623590 212 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 AC103710.2-202ENST00000641454 2853 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 SAMMSON-210ENST00000641260 1308 ntBASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
TMEM88BA6NKF7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 AP000547.3-204ENST00000588548 2523 ntBASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 TPTE2P4-201ENST00000258589 1605 ntBASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TMEM88BA6NKF7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms