Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 RNA5SP197-201ENST00000363357 119 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 SNORD116.1-201ENST00000365628 92 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 RNU6-906P-201ENST00000384700 70 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 RNU6-55P-201ENST00000411092 107 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 RNU6-954P-201ENST00000411355 107 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AL356968.1-201ENST00000416622 474 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AL513175.2-201ENST00000422071 443 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC010285.1-201ENST00000470580 392 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 RPS15AP17-201ENST00000470598 390 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC093663.1-201ENST00000497190 394 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 GTF2IP9-201ENST00000502460 301 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 TRAV31-201ENST00000502780 342 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 HMGB1P28-201ENST00000507778 552 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC026412.2-201ENST00000512270 1075 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 RN7SKP60-201ENST00000516985 239 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 SNORA31.20-201ENST00000517111 133 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 OR4P1P-201ENST00000530808 1136 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AP000619.3-201ENST00000535634 1127 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC006518.1-201ENST00000541449 943 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 XIAPP1-201ENST00000603162 600 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC128687.1-201ENST00000605304 619 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC006213.4-201ENST00000616184 634 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AL355365.1-201ENST00000616480 294 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AL356321.1-201ENST00000621360 228 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 MIR1322-201ENST00000638013 71 ntBASIC3.21□□□□□ -1.9
LRIT2A6NDA9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRIT2A6NDA9 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AP001350.1-201ENST00000601906 1524 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AF127577.6-201ENST00000623352 2191 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 RNU6-560P-201ENST00000364007 108 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 RNU6-1242P-201ENST00000391052 103 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 RNU6-584P-201ENST00000410350 95 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 RPS7P15-201ENST00000415804 584 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC012065.2-201ENST00000421295 375 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 GLRXP1-201ENST00000423261 334 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 MTND2P20-201ENST00000440805 661 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 MTCO2P25-201ENST00000447065 681 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 CYCSP35-201ENST00000451978 304 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 USP9YP34-201ENST00000453983 808 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AL445669.2-201ENST00000454425 421 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC026410.2-201ENST00000460281 156 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 HMGB1P25-201ENST00000468402 607 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 RPL21P129-201ENST00000491732 478 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 RNU6-1073P-201ENST00000517182 106 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC104986.1-201ENST00000517978 436 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC093331.1-201ENST00000521474 169 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 CCNG2P1-201ENST00000549521 1000 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 EEF1B2P4-201ENST00000551398 348 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC245036.5-201ENST00000596330 847 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 BNIP3P26-201ENST00000600827 554 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 RPL23AP92-201ENST00000603609 255 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC069304.2-201ENST00000605154 435 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC107075.1-201ENST00000613695 314 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 AC091925.2-201ENST00000625059 256 ntBASIC3.2□□□□□ -1.9
LRIT2A6NDA9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRIT2A6NDA9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRIT2A6NDA9 AC099786.3-201ENST00000565735 1410 ntBASIC3.19□□□□□ -1.9
LRIT2A6NDA9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
LRIT2A6NDA9 SNORA51.2-201ENST00000364595 132 ntBASIC3.19□□□□□ -1.9
LRIT2A6NDA9 RNU6-712P-201ENST00000410558 100 ntBASIC3.19□□□□□ -1.9
LRIT2A6NDA9 RN7SKP27-201ENST00000410684 333 ntBASIC3.19□□□□□ -1.9
LRIT2A6NDA9 RNU2-37P-201ENST00000410695 177 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms