Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 AC004925.1-201ENST00000624256 2706 ntBASIC3.28□□□□□ -1.88
TRBV5-5A0A0J9YX44 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.28□□□□□ -1.88
TRBV5-5A0A0J9YX44 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRBV5-5A0A0J9YX44 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.28□□□□□ -1.89
TRBV5-5A0A0J9YX44 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNU6-359P-201ENST00000365466 108 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 SNORD116-2-201ENST00000384274 95 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNU6-1207P-201ENST00000384343 107 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 SNORD116-6-201ENST00000384711 96 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 RPS4XP9-201ENST00000405151 780 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 SNORA57.3-201ENST00000411095 141 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC006989.1-201ENST00000427212 131 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL390023.1-201ENST00000428836 262 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 RSU1P2-202ENST00000437884 485 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AP000542.1-201ENST00000448473 371 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 ZNF114P1-201ENST00000453500 292 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 OR6K1P-201ENST00000456766 971 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 RN7SL610P-201ENST00000463845 291 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 RPS3AP50-201ENST00000487064 803 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC034222.1-201ENST00000494052 532 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC231760.1-201ENST00000498002 260 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 OR2A20P-203ENST00000498397 1268 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 DSTNP2-201ENST00000504533 515 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC005921.1-201ENST00000510589 286 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 SNORA31.20-201ENST00000517111 133 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 MTCO1P49-201ENST00000523429 802 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 MED28P5-201ENST00000528254 438 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AP004242.1-201ENST00000533701 349 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC018630.1-201ENST00000541376 925 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC084824.1-201ENST00000550917 1005 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC011260.1-201ENST00000578420 472 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 MIR544B-201ENST00000582372 78 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 SNORD84-203ENST00000584275 78 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC112187.2-201ENST00000604345 283 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL590099.1-201ENST00000615276 138 ntBASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV5-5A0A0J9YX44 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 XIAPP3-201ENST00000312918 795 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNU6-501P-201ENST00000364072 100 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNU6-853P-201ENST00000364306 107 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNA5SP189-201ENST00000364920 115 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNA5SP424-201ENST00000390988 115 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC025750.1-201ENST00000399891 379 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 TPMTP3-201ENST00000411928 735 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 TOMM22P1-201ENST00000418578 312 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 RPL36AP36-201ENST00000418616 301 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL137014.1-201ENST00000420490 1226 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 MTND2P22-201ENST00000444325 1033 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 Z83846.1-201ENST00000446798 265 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 SNRPGP5-201ENST00000456003 220 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC099563.1-201ENST00000456086 418 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 ARL2BPP6-201ENST00000512757 439 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC108064.1-201ENST00000513791 460 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNA5SP164-201ENST00000516533 110 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC106038.2-201ENST00000520706 568 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC109635.4-202ENST00000531666 412 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC013444.2-201ENST00000603317 787 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL139286.1-201ENST00000604465 483 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC097065.2-201ENST00000608159 533 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 RMST_8.1-201ENST00000610287 165 ntBASIC3.26□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms