Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HLA-DRB4X5D2U9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 RPS20P25-201ENST00000412447 352 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 ZNF833P-201ENST00000424938 1494 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 RPL23AP83-201ENST00000434984 473 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC129850.1-201ENST00000436203 508 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC093156.1-201ENST00000440382 670 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 RPS24P13-201ENST00000442520 397 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AL135938.1-201ENST00000443141 297 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 HMGB1P48-201ENST00000446155 598 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC126121.1-201ENST00000482313 553 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC080014.1-201ENST00000496877 1201 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC004062.1-201ENST00000509926 645 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 SNORA74D-201ENST00000516404 141 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 TPMTP1-201ENST00000592307 737 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AL451007.1-201ENST00000595491 289 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 RPL12P50-201ENST00000603116 116 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AL049779.4-201ENST00000604500 156 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 AC009501.3-201ENST00000605001 1352 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 FO624990.1-201ENST00000636373 85 ntBASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DRB4X5D2U9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC087565.3-202ENST00000642085 1603 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 SNORA18.3-201ENST00000384122 132 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AL138827.1-201ENST00000402666 306 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 RNA5SP21-201ENST00000410917 96 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AL513477.1-202ENST00000417061 214 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 HSFY3P-201ENST00000444242 1191 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC023512.1-201ENST00000444513 499 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AL031183.1-201ENST00000457667 207 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 RNA5SP402-201ENST00000517148 110 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 CR383656.14-201ENST00000551951 406 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC092474.3-201ENST00000603022 568 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC005046.1-201ENST00000608515 625 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AL161734.1-201ENST00000609720 557 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC140725.3-201ENST00000616193 880 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 AC026241.1-201ENST00000517873 2142 ntBASIC2.03□□□□□ -2.08
HLA-DRB4X5D2U9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC099654.7-201ENST00000635788 2127 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 RNA5SP393-201ENST00000363423 117 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 RNU6-761P-201ENST00000384148 107 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 MIR483-201ENST00000385070 76 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 SNORA48.2-201ENST00000390926 124 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 RNU6-837P-201ENST00000391056 108 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 RNU2-25P-201ENST00000411041 191 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC096664.2-201ENST00000411843 406 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 MTCO1P45-201ENST00000431457 267 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 snoU13.3-201ENST00000459441 104 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC016550.3-201ENST00000515706 767 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 RNA5SP367-201ENST00000516557 118 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 OR7K1P-201ENST00000546439 926 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 MIR3200-201ENST00000580767 85 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms