Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CAPN6Q9Y6Q1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.22□□□□□ -1.57
CAPN6Q9Y6Q1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CAPN6Q9Y6Q1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CAPN6Q9Y6Q1 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CAPN6Q9Y6Q1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CAPN6Q9Y6Q1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
CAPN6Q9Y6Q1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CAPN6Q9Y6Q1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CAPN6Q9Y6Q1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CAPN6Q9Y6Q1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
CAPN6Q9Y6Q1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CAPN6Q9Y6Q1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 MUC2-202ENST00000613187 4845 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 Y_RNA.28-201ENST00000362554 111 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RNU1-83P-201ENST00000363426 164 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 U3.12-201ENST00000364498 214 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 MIR558-201ENST00000384920 94 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RNU6-1106P-201ENST00000390845 107 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RNU6-903P-201ENST00000391270 109 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 MIR548F5-201ENST00000408421 86 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RN7SKP125-201ENST00000410481 302 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RNU6-370P-201ENST00000411008 104 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RNU6-1304P-201ENST00000411374 106 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 E2F6P2-201ENST00000420708 748 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RPL7L1P9-201ENST00000431298 745 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 UBE2V1P13-201ENST00000436983 439 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RPL34P20-201ENST00000442771 351 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RPL32P28-201ENST00000443577 397 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC000111.2-201ENST00000448200 210 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RPL7P52-201ENST00000449200 742 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 RNU7-182P-201ENST00000459009 62 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 PGAM1P13-201ENST00000507497 754 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC017037.1-201ENST00000508460 471 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 COPS8P3-201ENST00000526024 482 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC011979.2-201ENST00000527568 352 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AP005435.4-201ENST00000529514 284 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC103843.2-201ENST00000530523 682 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 APOOP3-201ENST00000536787 586 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 MIR4503-201ENST00000582187 83 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC011373.1-201ENST00000607270 237 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AL049794.2-201ENST00000616301 365 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC087588.2-201ENST00000617667 426 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC007546.1-201ENST00000619452 559 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 AC244100.1-202ENST00000621554 382 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 DHX40P1-201ENST00000588725 1412 ntBASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN6Q9Y6Q1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 AC008079.2-201ENST00000623543 20396 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 RNA5SP258-201ENST00000362750 119 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 RNU5A-8P-201ENST00000364102 114 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 SNORA62.1-201ENST00000364287 154 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 SNORD96B-201ENST00000386148 79 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 AL031985.1-201ENST00000392713 418 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 MIR548K-201ENST00000408406 116 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 AC074085.1-201ENST00000413598 418 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 OR6C66P-201ENST00000414917 930 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 SNRPEP4-201ENST00000435815 279 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 PRPF38AP2-201ENST00000438179 851 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 PRPS1P1-201ENST00000445305 876 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 AC021382.1-201ENST00000483523 359 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 AC106872.2-201ENST00000494303 480 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 FTH1P21-201ENST00000512179 511 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 PTP4A1P4-201ENST00000512479 322 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 RPL39P5-202ENST00000512505 151 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 SMURF2P1-201ENST00000514992 481 ntBASIC5.2□□□□□ -1.58
CAPN6Q9Y6Q1 MYL12AP1-201ENST00000518490 515 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms