Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SNORA48.2-201ENST00000390926 124 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AL591034.1-201ENST00000407447 340 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AL513477.1-202ENST00000417061 214 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 ATP5F1P1-201ENST00000433775 569 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AP000936.2-201ENST00000447151 681 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 RPL23AP15-201ENST00000450202 459 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC011753.1-201ENST00000451001 220 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 S100A11P2-201ENST00000467589 312 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 MTCO3P35-201ENST00000485582 781 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 RPL36AP51-201ENST00000487216 318 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 LINC00888-204ENST00000487386 421 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC090096.1-201ENST00000489168 390 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC006445.2-201ENST00000510061 472 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 HMGB3P3-201ENST00000510526 400 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC093755.1-201ENST00000512950 1023 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 RN7SKP24-201ENST00000515888 284 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 RN7SKP40-201ENST00000517211 242 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 CENPUP2-201ENST00000555897 1186 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC025281.1-201ENST00000567026 265 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 LARP7P3-201ENST00000579888 337 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 MIR3200-201ENST00000580767 85 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AL513477.2-201ENST00000607858 568 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC091564.4-201ENST00000533934 2194 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 AC135776.4-201ENST00000624300 1904 ntBASIC1.66□□□□□ -2.14
UBE2D4Q9Y2X8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.14
UBE2D4Q9Y2X8 AC069528.2-201ENST00000624849 1991 ntBASIC1.65□□□□□ -2.14
UBE2D4Q9Y2X8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 NDUFB4P4-201ENST00000404822 243 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC004022.2-201ENST00000413824 193 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 HMGN2P30-201ENST00000423237 256 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 MORF4L1P7-201ENST00000426038 703 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 RPL21P66-201ENST00000426566 466 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 MTCO1P45-201ENST00000431457 267 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 TRBV26-201ENST00000456572 344 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC026801.2-201ENST00000515352 425 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 RNA5SP320-201ENST00000516263 124 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC113192.3-201ENST00000529152 742 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 SNRPGP15-201ENST00000600149 222 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC008083.4-201ENST00000615076 444 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AC092608.2-201ENST00000624427 218 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 AL359693.1-201ENST00000614959 2407 ntBASIC1.65□□□□□ -2.15
UBE2D4Q9Y2X8 RNF6P1-201ENST00000444889 1784 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 SNORA5B-201ENST00000363786 132 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AL359511.1-201ENST00000402970 211 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AC007064.1-201ENST00000412238 351 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 Z75741.2-201ENST00000417272 1167 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 FNDC3CP-201ENST00000420795 1155 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AC244098.2-201ENST00000422068 99 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 WARS2P1-201ENST00000429678 537 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 FCF1P1-201ENST00000432690 571 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms