Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL451050.1-201ENST00000450126 415 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AL033528.1-201ENST00000453780 140 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 RPL30P11-201ENST00000495304 339 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 PAICSP4-201ENST00000517543 1253 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AC034105.4-201ENST00000568304 277 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AP002360.3-201ENST00000607673 710 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AC109347.2-201ENST00000610220 349 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AL359535.1-201ENST00000612100 1087 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 uc_338.32-201ENST00000615087 172 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 AL603839.4-201ENST00000624658 1005 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 U6.101-201ENST00000637707 76 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 CRYM-AS1-204ENST00000637983 556 ntBASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSX2IPQ9Y2D8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 GDI2P1-201ENST00000429312 1336 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 RNU5A-6P-201ENST00000384136 116 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 SNORA40.3-201ENST00000390964 122 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 RPL32P23-201ENST00000397237 405 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 MIR1305-201ENST00000408300 86 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 RN7SKP266-201ENST00000410232 287 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 Y_RNA.598-201ENST00000410480 95 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 USP9YP13-201ENST00000417797 480 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 Z95327.1-201ENST00000446082 482 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AL162151.2-201ENST00000448875 158 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 TRBV26-201ENST00000456572 344 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 RNU7-136P-201ENST00000458819 69 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 snoU109.1-201ENST00000459339 135 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC026410.2-201ENST00000460281 156 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 RPL7P22-201ENST00000466005 733 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC126182.1-201ENST00000478134 357 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 TMED11P-201ENST00000479478 690 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC022447.3-201ENST00000506865 495 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC020593.1-201ENST00000507399 299 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AF131216.2-201ENST00000512316 564 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 RNU6-1178P-201ENST00000516674 107 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC134698.4-201ENST00000523451 826 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 HSPA8P13-201ENST00000523715 472 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AP002748.2-201ENST00000528671 348 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC013828.2-201ENST00000532487 235 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC087883.1-201ENST00000551882 391 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC009063.1-201ENST00000563342 702 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AL354984.3-201ENST00000604803 325 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 MIR6867-201ENST00000610636 67 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AC095031.1-201ENST00000623685 672 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 AP002907.1-201ENST00000606361 1430 ntBASIC4.54□□□□□ -1.68
SSX2IPQ9Y2D8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 MIR372-201ENST00000362225 67 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 Y_RNA.582-201ENST00000391023 95 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AIMP1P1-201ENST00000418670 937 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 EIF1P1-201ENST00000421436 341 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 RPL7P2-201ENST00000427639 268 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC109583.1-201ENST00000432156 268 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms