Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 SNORA26.9-201ENST00000391322 122 ntBASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 PTP4A1P7-201ENST00000423476 514 ntBASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 MTATP6P11-201ENST00000428071 670 ntBASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 AC091917.2-201ENST00000505002 744 ntBASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 RPS27AP18-201ENST00000515536 459 ntBASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 AP003499.2-201ENST00000624100 483 ntBASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHANK2Q9UPX8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AC091152.2-201ENST00000591628 2569 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 HMGB1P11-201ENST00000413899 637 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 RPS24P8-201ENST00000431490 402 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AC011753.1-201ENST00000451001 220 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AC023043.3-201ENST00000593113 385 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 snoU13.31-201ENST00000607291 104 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AC023813.4-201ENST00000607580 580 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AP004247.3-201ENST00000608682 624 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AC009831.4-201ENST00000620744 325 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 AC093591.3-201ENST00000634516 308 ntBASIC3.38□□□□□ -1.87
SHANK2Q9UPX8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 RNA5SP88-201ENST00000365560 109 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AL354719.1-201ENST00000406535 843 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 RNA5SP344-201ENST00000411081 104 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AC098826.1-201ENST00000433943 471 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 CFTRP1-201ENST00000456646 183 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AP000926.1-201ENST00000479573 241 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AC106872.3-201ENST00000495104 446 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 RNA5SP200-201ENST00000516360 103 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 SCARNA16.3-201ENST00000516595 184 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AC012182.1-201ENST00000570133 895 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 MIR6845-201ENST00000613182 61 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AL606537.1-201ENST00000607258 2011 ntBASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHANK2Q9UPX8 AL359715.4-201ENST00000606629 1436 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 RN7SKP32-201ENST00000410167 303 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 TRIM60P18-201ENST00000441518 828 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 NPM1P49-201ENST00000448027 714 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 AC004263.1-201ENST00000479327 332 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 AC103710.2-201ENST00000609912 942 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 CR589904.2-201ENST00000612533 440 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 VN1R7P-201ENST00000619242 903 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 AL160394.1-201ENST00000624765 724 ntBASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SHANK2Q9UPX8 MIR21-201ENST00000362134 72 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 Y_RNA.116-201ENST00000363292 103 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 RNU6-321P-201ENST00000410912 106 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 NDUFA5P6-201ENST00000542110 379 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AL160237.3-201ENST00000604114 1013 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 MIR221-201ENST00000385135 110 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AL353729.1-201ENST00000425044 720 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AC108667.1-201ENST00000428618 249 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AL391813.2-201ENST00000609113 322 ntBASIC3.35□□□□□ -1.87
SHANK2Q9UPX8 AL359893.1-201ENST00000447628 1580 ntBASIC3.34□□□□□ -1.87
SHANK2Q9UPX8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.34□□□□□ -1.87
SHANK2Q9UPX8 AC008432.1-201ENST00000615912 1320 ntBASIC3.34□□□□□ -1.87
SHANK2Q9UPX8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.34□□□□□ -1.87
SHANK2Q9UPX8 MTND5P28-201ENST00000438005 1594 ntBASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 PHKBP1-201ENST00000450951 1951 ntBASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms