Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 REREP2Y-201ENST00000439103 200 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC243772.1-201ENST00000451620 410 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AP1S2P1-201ENST00000457344 379 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 HMGB3P30-201ENST00000457863 606 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RPL7P49-201ENST00000471402 708 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RPL23AP11-201ENST00000475260 469 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 HSPD1P15-201ENST00000505573 1122 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-120P-201ENST00000516077 103 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-313P-201ENST00000516317 112 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-1038P-201ENST00000516516 104 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-1016P-201ENST00000516689 94 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RN7SKP219-201ENST00000516825 296 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-410P-201ENST00000517006 107 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC109329.1-201ENST00000518744 317 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC023043.2-201ENST00000589678 1026 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC012669.1-201ENST00000603209 283 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RPL23AP61-201ENST00000623642 466 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC091953.2-201ENST00000623979 160 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC245100.2-201ENST00000454544 1679 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 USP9YP4-201ENST00000424401 1745 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 MIR133A2-201ENST00000347538 102 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 MIR133B-201ENST00000362210 119 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-289P-201ENST00000364093 107 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 RNY1P12-201ENST00000364251 105 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 Y_RNA.378-201ENST00000365652 113 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 SNORA56-201ENST00000383966 129 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-1154P-201ENST00000391001 104 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AL606923.1-201ENST00000406616 190 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 RNA5SP36-201ENST00000410197 133 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 BX323014.1-201ENST00000412876 237 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC093162.1-201ENST00000419682 124 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 MYL8P-204ENST00000431574 518 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 SNRPEP7-201ENST00000438350 220 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 CBX1P2-201ENST00000453841 458 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC133473.1-201ENST00000455173 299 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 Y_RNA.644-201ENST00000459006 113 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 RNU7-120P-201ENST00000459334 63 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 RPS3AP41-201ENST00000462701 778 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 MRPL42P6-201ENST00000486397 371 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC007686.1-201ENST00000488511 463 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 TXNP6-201ENST00000510190 310 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 OR51K1P-201ENST00000510214 950 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC108120.2-201ENST00000512973 294 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-1278P-201ENST00000516130 107 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 Y_RNA.674-201ENST00000516362 113 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AP006587.4-201ENST00000526053 529 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 HSBP1P1-201ENST00000555205 166 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC127381.1-201ENST00000555979 939 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC011447.4-201ENST00000587562 111 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AC009229.3-201ENST00000608056 282 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 AL122126.1-201ENST00000546905 1318 ntBASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDZRN3Q9UPQ7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC100757.1-201ENST00000616872 1835 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms