Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SNORA62.3-201ENST00000365110 153 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 RPL23AP39-201ENST00000415533 405 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AL049610.1-201ENST00000423374 372 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC093698.1-201ENST00000423843 571 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 RPL30P3-201ENST00000424262 333 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC091286.1-201ENST00000431233 461 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 LARP1BP3-201ENST00000437229 869 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 MTND1P30-201ENST00000441241 901 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 RPL26P28-201ENST00000451325 435 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 HMGN3P1-201ENST00000453847 193 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC099563.1-201ENST00000456086 418 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC005726.1-201ENST00000494679 427 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AP002812.1-201ENST00000495378 474 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 FTH1P24-201ENST00000503502 462 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 HMGN1P11-201ENST00000508668 303 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC091965.2-201ENST00000512324 613 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AL389895.1-201ENST00000554127 252 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 MIR4458-201ENST00000578872 75 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 MIR4429-201ENST00000580105 73 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 MIR4444-1-201ENST00000581696 74 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 MIR4444-2-201ENST00000584390 74 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC073544.2-201ENST00000601155 540 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC083899.3-201ENST00000603413 594 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC092354.1-201ENST00000606057 376 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC103591.3-201ENST00000608684 209 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC106028.5-201ENST00000610332 395 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC103858.2-201ENST00000621471 543 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AL356121.2-201ENST00000624715 780 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC079228.1-201ENST00000624774 1049 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 AC009093.8-201ENST00000641769 292 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 XPOTP1-201ENST00000443317 2398 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 LINC00561-201ENST00000565815 2738 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 DDX43P2-201ENST00000604753 1354 ntBASIC3.9□□□□□ -1.78
SIX4Q9UIU6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SIX4Q9UIU6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SIX4Q9UIU6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.9□□□□□ -1.78
SIX4Q9UIU6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SIX4Q9UIU6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 U3.4-201ENST00000363352 213 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AL359837.1-201ENST00000381357 287 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 Z99497.1-201ENST00000421282 135 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 SDCBPP2-201ENST00000424643 885 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 RPL30P9-201ENST00000465586 330 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 MTATP6P22-201ENST00000507369 598 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 MTND4P2-201ENST00000507767 1203 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC022447.1-201ENST00000515358 464 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 SNORA70.18-201ENST00000516696 98 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 RNA5SP143-201ENST00000516936 115 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC090281.1-201ENST00000523019 276 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC008489.1-201ENST00000524271 483 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 DEFB131D-201ENST00000526803 184 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC135001.1-201ENST00000544546 283 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 CYCSP2-201ENST00000558168 301 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 SULT1C2P1-202ENST00000562418 459 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AL133457.1-201ENST00000564251 987 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC012213.3-201ENST00000577199 777 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC008507.1-201ENST00000587506 734 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms