Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
USP25Q9UHP3 AC091489.2-201ENST00000566263 604 ntBASIC4.85□□□□□ -1.63
USP25Q9UHP3 AC053481.3-201ENST00000577881 843 ntBASIC4.85□□□□□ -1.63
USP25Q9UHP3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.85□□□□□ -1.63
USP25Q9UHP3 MIR548AB-201ENST00000584917 84 ntBASIC4.85□□□□□ -1.63
USP25Q9UHP3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.85□□□□□ -1.63
USP25Q9UHP3 MIR7702-201ENST00000621931 59 ntBASIC4.85□□□□□ -1.63
USP25Q9UHP3 CR381572.1-201ENST00000625098 102 ntBASIC4.85□□□□□ -1.63
USP25Q9UHP3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP25Q9UHP3 AC097714.1-201ENST00000511272 1647 ntBASIC4.85□□□□□ -1.63
USP25Q9UHP3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP25Q9UHP3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.85□□□□□ -1.63
USP25Q9UHP3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
USP25Q9UHP3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP25Q9UHP3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP25Q9UHP3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP25Q9UHP3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC004520.1-201ENST00000608362 1413 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 RNU6-989P-201ENST00000362756 107 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 RNU5F-6P-201ENST00000362979 116 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 MIR3074-201ENST00000384885 81 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 RNU6-821P-201ENST00000390995 107 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 U3.29-201ENST00000391296 212 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 RNU2-15P-201ENST00000410692 191 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 TMSB10P2-201ENST00000416049 131 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 MTATP6P27-201ENST00000416987 621 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AL807761.1-201ENST00000417622 171 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC083875.1-201ENST00000419509 405 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 RPL7P30-201ENST00000420888 709 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AL831737.1-201ENST00000441288 271 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AL512326.1-201ENST00000443050 721 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC005297.2-201ENST00000450430 606 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 SNORD42A-201ENST00000459584 64 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 MEMO1P3-201ENST00000459811 302 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC025881.1-201ENST00000518851 512 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AP006289.1-201ENST00000538089 277 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 EEF1B2P4-201ENST00000551398 348 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC090616.5-202ENST00000582111 297 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AL022154.1-201ENST00000604698 785 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC006566.1-201ENST00000608943 513 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 AL356596.1-201ENST00000624230 379 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 SEPT14P19-203ENST00000633205 211 ntBASIC4.84□□□□□ -1.63
USP25Q9UHP3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP25Q9UHP3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
USP25Q9UHP3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
USP25Q9UHP3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
USP25Q9UHP3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC095050.2-201ENST00000510748 1458 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC012618.3-205ENST00000637896 1496 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AL031985.3-201ENST00000565390 2449 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 RNU5F-7P-201ENST00000363696 115 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 RNU6-263P-201ENST00000363811 107 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 RNVU1-6-201ENST00000364688 164 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 MIR129-1-201ENST00000384972 72 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 Y_RNA.582-201ENST00000391023 95 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 SNORA3C-201ENST00000408792 125 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 RNU4-78P-201ENST00000410940 126 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 FAR2P2-201ENST00000413041 594 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 FAR2P4-202ENST00000425399 584 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 UBE2V1P8-201ENST00000437166 265 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC239367.2-201ENST00000447309 705 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC003071.1-201ENST00000451219 789 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 RPL23AP81-201ENST00000455252 467 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms